Ll_transcript_402263

• Id Trinity: TRINITY_DN50540_c0_g1_i4
• Name Transcript: Ll_transcript_402263
• Sequence: GGAAGGAGATAATTCTTTGTTGGACACAATATCCAATAATAAAGGCAGCACTTTGGATGCTGGTGATGAAGCGTTAATCCCTGAAGTTGAGGAGGATGAT TCATTATCATTGGAAGGTGATCAGATTATTGATAGTTCATACTCTCATTCGGCAATAAGTGCGAACAGTAGCTTGTGTGGGGAGGAGTTCATCAATTTTG AGGCTAATTCAGATGTCGGGAAACCATGTTCCATAGATATAGAGAAGAGCATATGTGGTGTCAATATTGTTGTCCGGCCTGCTGATTTGGGACCAAACGT CAAGACAGATATGATGAGTGAACCCCTTGCTGTTGCAGGTAGCCTTGAAGAAGAGACCGAAGTAGGATCTGTCTCTGAGCCTTCTGCAACTGGTCTTAAT CAGCAGGAAAAAGGAGGAAGTGGAACAGTTGGGCGGAGTGTTTTTGAATTGGATTATGCACCACTTTGGGGATTTATATCTCTGTGTGGAAGAAGACCAG AGATGGAAGATGCAGTTACAACTGTACCTCGATTTTTGGAAATTCCTATTCAAATGCTAATTGGTGATCGGGTACTTGATGGAATGAACAAGTGTTTCAA TCAGCAGATGATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAAGTATTGCCGTGATCGTATCCATTTGGCCTTGGCCGAGGAA ATAGAACATGTAAAGGAAGGTCTCATTAGTGGGAGCATCATAGATGGTTGTCTAGATCAGTGGAAAAAAGCTTTCACCGATTGTTTCTTGAAGGTTGATG CTGAAATTGGAGGGAAAGTTAATAATGAACCTATTGCTCCAGAAACTGTTGGTTCCACAGCTGTTGTTGCCATCATATGTTCATCTCATATCATAGTCGC CAACTGTGGTGATTCAAGAGTGGTTCTTTGTCGTGGCAAAGAACCCATGGCTTTATCAGTGGATCATAAACCGAATCGAGATGATGAATATGCAAGAATT GAGGCAGCTGGTGGAAAGGTGATACAGTGGAATGGGCATCGTGTATTTGGTGTTCTTGCGATGTCACGGTCTATTGGTGATAGATATTTGAAGCCGTGGA TTATTCCAGAACCAGAAGTTATGTTTCTTCCCCGTGCGAAGGATGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACGAATGAAGA GGTGTGTGACATAGCTCGGAGACGGTTACTTCTCTGGCACAAGAAAAATGGCTTGGAACTACCCTCAGAGAGGGGAGAGGGAATTGAT
• Tissue: pods
• Gene name: LI_gene_177957;
• Additional information: details;

Expression of Ll_transcript_402263

FPKM

• PAB: 16.1
• PNAB: 15.5
• PS1: 17.9
• PS2: 10.2
• PS3: 16
• PW1: 15.8
• PW2: 14.7
• PW3: 13.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402263

• Blastp: Probable protein phosphatase 2C 6 from Oryza sativa with 65.88% of identity
• Blastx: Probable protein phosphatase 2C 6 from Oryza sativa with 65.88% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (4324201)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457815.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;