Id Trinity | TRINITY_DN50547_c1_g2_i11 |
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Name Transcript | Ll_transcript_404489 |
Sequence | AAACAATAGAATTTGCTTAGTTGCATAGAAACTATTTGTAAGCACCTTCAAGGTATATATCTACTCTTTTCTATTTCGCAATTATTAATCCCTGGAAATT TGTGTTCTTCAATTATTTTCTTTGCGTTTATGGTGCCGATATAATATAGAATTTGGAAGATTTTGATGTTCTGATTCGATATTATTTGTGAGTTCTTCAA AAGCGATGGAAAAGCGATAATCGGATTTGTTATGCCCTTCTATCTTGATTCGATGATTAGGGTTACGGGTTGTGGGTTTCTTCTCCACGTGGAAGTAATT TTGAAACATTGTTCATGATTTTATTTTGTGAATAGTCACTCAACACAAGAGCTTTATGGAATATTTCTAAATTAATGTGACAATTTGATTCACGTGGGAA ACTATCTTCAGGTCGATTACGGAGGCAATACTTATATTCTATCGAAGTTCGATATAATGTTGTGTTTTGATACAAGATCGTTAATCGTATAGTTTGCATC AATTGATTCGTCGAATCGAATTATGGAGGTCTTTTTTAACCTGTAATATTATTTGTCTTCCAAGTTGTATAAATGCAAGTTTGTAATATTATTTGTCTTC AGAAAATTTTGATCTTGAAAATTGTTATAAACCATTAAACCGTTCTTGTTTATCAAGAAATTGAGGAGTGATATAGTTTTGTTTGGTTGTTTGTTTGTAT GTAGATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATAACTTTGGAAGTTGAGAGTTCAGATACCATAGACAATGTTAAAGCCAAGATCCAAGAT AAGGAAGGGATCCCACCAGACCAGCAGCGGCTAATTTTTGCTGGGAAGCAACTCGAAGATGGTCGCACCCTTGCAGACTATAACATCCAGAAGGAATCAA CCCTTCATTTGGTTCTTCGTCTCCGTGGCGGTATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATTACCCTTGAGGTGGAGAGTTCTGACACCAT TGACAATGTGAAAGCAAAAATCCAAGACAAGGAGGGTATTCCGCCAGATCAGCAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTT GCTGACTATAACATTCAGAAGGAGTCAACTCTTCACCTTGTGTTACGTCTTCGTGGGTGCATTGTCAACCAACAATTCAAGAATGTTATGAAGAAGAAAA AACCAAGACATATATGCAGAACACCCATTATGATATCCACATCTATTGGTAATGCTCACAGGATTGAAGGGATTCATAATGGCAATACAACATAATAAGA ATTCCAGTAGTTGAAAAACCTTTATTAACAGATGATAATACATCTCAAATGAAGGTGCTAAGAAGGGTGGGTTAAATGATAACTATCATCAGATTCAGCA CAATGTCAAAAGTTCTGCCGCTACATATCTTGATTAGGTTAGCATGGATTGTCTGGTTATCAATGCATCCCATCAGATGCATCCTTCACCAAGATCCTTA AGGATAGATCACATGTTTAATTATTGTTTTCTAAGCAGCTTAAAGTTTCCATTAGTCATCTAACAAAGTTGAAAGAAACAAATCTTGCACAAAACCAGAT CTCCCAGCAGATTGTCTCATCCTTTTCTCCCTCTCTTCAACACTCAATGAAGGATCAAAACTGCAGAGAGACAGATCAAAGGGGTGATATTTAAGGGCAT TCTTTAGTAAGGATTCAATACTAATGACCAGGTAACCAAAATTCATGAAAAAAGCACCTTGATTTCCAAATATGTACAGGTGCTGTATTCTTTGCAGAAG AATCTTCAGAACTTGTTACCATAGATTTAGAAATTTCTTCTGCTTCACAAGCAGGGAAATTTAAAATAAGAGAGGATAGGAATGGATCGGTAGCTGCATT AGATACTATAGAATTGTTTGACCGATATCCACCACTTCCGCCACCAAGGAGCACCTGTAAATGAGCCTCACGAAGATCTCGCCCTAAAAGAGACAATGTC TGACTGTTTGGAATAGCAACCCTTCTTAACCTGCGCCTTCTCTGTAAGTAATCCTCAGTTAAGAGTAGCAATTGACGTTTTCATTTTTTAACTTAATAAA TAATCAATCATATGAGCAGGTTAATTAGTTTGAATCAAAATAACAGTATAAAGGATATCTTAAATAAGTGCCCATGTTGTAGCGTTATGTGACTCAACAT GTCCCGTGCAACTTTAACTGAGCATATAGGACAACTCTGCACAGAAGAAAAACGAAGGATGAGACTATCATAAGCAGAATTTGAGACCAGTTCAATCTTT GCAGCAGGAATGTAAAGTAACAACCATAGAAGAGAAAAATGGTATTCATTGGTCTTCAGCTTCTTTCGTTTTTCATTTACATAGTTGATTTGTACAGATG CTTCAAAAGTCGCAAATCACATCACATGTAATGGCTAAATTTAGCAGCCAGTCCATCTCAATGACCAAATGAATTTTAATGACAGCTAATGTTTTAGGTT GAGAGTTCAGAAGATTGTTGATCAACAGATTCATTTTTGCGAAATGATATAGAATCATTTCCCATTTGATTAAGTGGTTGTTAAGAACATACCTCCTGAA TGGTTTTGGATATCTGAATTAAGAACAGGTATGCAATACACAAACAAAAAATGGACAAAGAGAATACTAATCGCGTGCTCAACAAGTATATAGGTAGAAA GAAAATGGTTTGAAGGCATAAAAACAAGAAGCCTCCATAATAACCTATTTCTTTCCATGAATTGCTTTTGATTGCTCACTCATCTTAAGAGATAACAAAT TCACAGCTAGACCATATAAGAACTCTTCAAAGTGCATGCCTTCCTAGTCCGGAAAGTTTAAAAATACATGCTCGAGCTAATTTAGTCTCTGTAATTCTTC CTTTATTATAACCAAATTGCAAAGCATACGGAGAATAAGGGCAAAAGGCCAAAAGACAAAAGGAAACATGCTTATGCAGAATGCTAGAGTGAACTAGTAA ATTACAAATGCATTACATGTCCATGTCAATGAAAATGTAGACCATGTCATGAACCTAAGGCAGGTCACTTGTCCGAGATCCTAAATATCAATGACTTATA AAATATGTCATTATATCCCGGGGTGGTGCTTAGTGTTATAATGAGTGGCTATGGCTACCCCAAAATTCATAAAAGTCAAGTTTTTTACATGTATTTATTT TGTTCTGAAACAAATATAAATTCTTTAACTTGGCCCCCTAAATAAAGTATTCTTCTTCTTTGGTCTATTTAATAAAAATCTTCTAGTTCTGCCTCTGATT ATATGCCATTTGTATTTTGCACACCTGAAGTCTCAACCATTTTTATGCCTGAAATTGTCATGACTGACATTATATCTGTGTTTGCAGAATTAACACTCTG ATTCTCAATâBLAST |
Tissue | pods |
Gene name | LI_gene_178017; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404489
Blastp | Polyubiquitin from Hordeum with 100% of identity |
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Blastx | Polyubiquitin from Hordeum with 100% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000474) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445678.1) |
Pfam | Ubiquitin-2 like Rad60 SUMO-like (PF11976.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |