Ll_transcript_404474

• Id Trinity: TRINITY_DN50547_c1_g2_i3
• Name Transcript: Ll_transcript_404474
• Sequence: AAACAATAGAATTTGCTTAGTTGCATAGAAACTATTTGTAAGCACCTTCAAGGTATATATCTACTCTTTTCTATTTCGCAATTATTAATCCCTGGAAATT TGTGTTCTTCAATTATTTTCTTTGCGTTTATGGTGCCGATATAATATAGAATTTGGAAGATTTTGATGTTCTGATTCGATATTATTTGTGAGTTCTTCAA AAGCGATGGAAAAGCGATAATCGGATTTGTTATGCCCTTCTATCTTGATTCGATGATTAGGGTTACGGGTTGTGGGTTTCTTCTCCACGTGGAAGTAATT TTGAAACATTGTTCATGATTTTATTTTGTGAATAGTCACTCAACACAAGAGCTTTATGGAATATTTCTAAATTAATGTGACAATTTGATTCACGTGGGAA ACTATCTTCAGGTCGATTACGGAGGCAATACTTATATTCTATCGAAGTTCGATATAATGTTGTGTTTTGATACAAGATCGTTAATCGTATAGTTTGCATC AATTGATTCGTCGAATCGAATTATGGAGGTCTTTTTTAACCTGTAATATTATTTGTCTTCCAAGTTGTATAAATGCAAGTTTGTAATATTATTTGTCTTC AGAAAATTTTGATCTTGAAAATTGTTATAAACCATTAAACCGTTCTTGTTTATCAAGAAATTGAGGAGTGATATAGTTTTGTTTGGTTGTTTGTTTGTAT GTAGATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATAACTTTGGAAGTTGAGAGTTCAGATACCATAGACAATGTTAAAGCCAAGATCCAAGAT AAGGAAGGGATCCCACCAGACCAGCAGCGGCTAATTTTTGCTGGGAAGCAACTCGAAGATGGTCGCACCCTTGCAGACTATAACATCCAGAAGGAATCAA CCCTTCATTTGGTTCTTCGTCTCCGTGGCGGTATGCAAATCTTTGTGAAAACCTTGACCGGAAAAACCATTACCCTTGAGGTGGAGAGTTCTGACACCAT TGACAATGTGAAAGCAAAAATCCAAGACAAGGAGGGTATTCCGCCAGATCAGCAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTT GCTGACTATAACATTCAGAAGGAGTCAACTCTTCACCTTGTGTTACGTCTTCGTGGGTGCATTGTCAACCAACAATTCAAGAATGTTATGAAGAAGAAAA AACCAAGACATATATGCAGAACACCCATTATGATATCCACATCTATTGGTAATGCTCACAGGATTGAAGGGATTCATAATGGCAATACAACATAATAAGA ATTCCAGTAGTTGAAAAACCTTTATTAACAGATGATAATACATCTCAAATGAAGGTGCTAAGAAGGGTGGGTTAAATGATAACTATCATCAGATTCAGCA CAATGTCAAAAGTTCTGCCGCTACATATCTTGATTAGGTTAGCATGGATTGTCTGGTTATCAATGCATCCCATCAGATGCATCCTTCACCAAGATCCTTA AGGATAGATCACATGTTTAATTATTGTTTTCTAAGCAGCTTAAAGTTTCCATTAGTCATCTAACAAAGTTGAAAGAAACAAATCTTGCACAAAACCAGAT CTCCCAGCAGATTGTCTCATCCTTTTCTCCCTCTCTTCAACACTCAATGAAGGATCAAAACTGCAGAGAGACAGATCAAAGGGGTGATATTTAAGGGCAT TCTTTAGTAAGGATTCAATACTAATGACCAGGGAAATTTAAAATAAGAGAGGATAGGAATGGATCGGTAGCTGCATTAGATACTATAGAATTGTTTGACC GATATCCACCACTTCCGCCACCAAGGAGCACCTGTAAATGAGCCTCACGAAGATCTCGCCCTAAAAGAGACAATGTCTGACTGTTTGGAATAGCAACCCT TCTTAACCTGCGCCTTCTCTGTAAGTAATCCTCAGTTAAGAGTAGCAATTGACGTTTTCATTTTTTAACTTAATAAATAATCAATCATATGAGCAGGTTA ATTAGTTTGAATCAAAATAACAGTATAAAGGATATCTTAAATAAGTGCCCATGTTGTAGCGTTATGTGACTCAACATGTCCCGTGCAACTTTAACTGAGC ATATAGGACAACTCTGCACAGAAGAAAAACGAAGGATGAGACTATCATAAGCAGAATTTGAGACCAGTTCAATCTTTGCAGCAGGAATGTAAAGTAACAA CCATAGAAGAGAAAAATGGTATTCATTGGTCTTCAGCTTCTTTCGTTTTTCATTTACATAGTTGATTTGTACAGATGCTTCAAAAGTCGCAAATCACATC ACATGTAATGGCTAAATTTAGCAGCCAGTCCATCTCAATGACCAAATGAATTTTAATGACAGCTAATGTTTTAGGTTGAGAGTTCAGAAGATTGTTGATC AACAGATTCATTTTTGCGAAATGATATAGAATCATTTCCCATTTGATTAAGTGGTTGTTAAGAACATACCTCCTGAATGGTTTTGGATATCTGAATTAAG AACAGGTATGCAATACACAAACAAAAAATGGACAAAGAGAATACTAATCGCGTGCTCAACAAGTATATAGGTAGAAAGAAAATGGTTTGAAGGCATAAAA ACAAGAAGCCTCCATAATAACCTATTTCTTTCCATGAATTGCTTTTGATTGCTCACTCATCTTAAGAGATAACAAATTCACAGCTAGACCATATAAGAAC TCTTCAAAGTGCATGCCTTCCTAGTCCGGAAAGTTTAAAAATACATGCTCGAGCTAATTTAGTCTCTGTAATTCTTCCTTTATTATAACCAAATTGCAAA GCATACGGAGAATAAGGGCAAAAGGCCAAAAGACAAAAGGAAACATGCTTATGCAGAATGCTAGAGTGAACTAGTAAATTACAAATGCATTACATGTCCA TGTCAATGAAAATGTAGACCATGTCATGAACCTAAGGCAGGTCACTTGTCCGAGATCCTAAATATCAATGACTTATAAAATATGTCATTATATCCCGGGG TGGTGCTTAGTGTTATAATGAGTGGCTATGGCTACCCCAAAATTCATAAAAGTCAAGTTTTTTACATGTATTTATTTTGTTCTGAAACAAATATAAATTC TTTAACTTGGCCCCCTAAATAAAGTATTCTTCTTCTTTGGTCTATTTAATAAAAATCTTCTAGTTCTGCCTCTGATTATATGCCATTTGTATTTTGCACA CCTGAAGTCTCAACCATTTTTATGCCTGAAATTGTCATGACTGACATTATATCTGTGTTTGCAGAATTAACACTCTGATTCTCAAT
• Tissue: pods
• Gene name: LI_gene_178017;
• Additional information: details;

Expression of Ll_transcript_404474

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404474

• Blastp: Polyubiquitin from Hordeum with 100% of identity
• Blastx: Polyubiquitin from Hordeum with 100% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000474)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445678.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;