Ll_transcript_404475

• Id Trinity: TRINITY_DN50547_c1_g2_i4
• Name Transcript: Ll_transcript_404475
• Sequence: AAACAATAGAATTTGCTTAGTTGCATAGAAACTATTTGTAAGCACCTTCAAGATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATAACTTTGGAA GTTGAGAGTTCAGATACCATAGACAATGTTAAAGCCAAGATCCAAGATAAGGAAGGGATCCCACCAGACCAGCAGCGGCTAATTTTTGCTGGGAAGCAAC TCGAAGATGGTCGCACCCTTGCAGACTATAACATCCAGAAGGAATCAACCCTTCATTTGGTTCTTCGTCTCCGTGGCGGTATGCAAATCTTTGTGAAAAC CTTGACCGGAAAAACCATTACCCTTGAGGTGGAGAGTTCTGACACCATTGACAATGTGAAAGCAAAAATCCAAGACAAGGAGGGTATTCCGCCAGATCAG CAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTTGCTGACTATAACATTCAGAAGGAGTCAACTCTTCACCTTGTGTTACGTCTTC GTGGTGGGTTTTAGCTACTTTGTGACATTGCTGAAGATCTCAGTGTCTATGCATACTGATGAAAGTCCTTGTGGCCCCTTAAAAACTATGGTTTTTTGTG GTTTCTGGTTGAAATATTTTCTGTTATTTCCAAATTTGCTATTTTCTTATGGTTTCTAAATACTTTTTTCAGTAGCAGACGGAAGAGCTATCAGTAGTAA AATATCGATACCCATCAATGTATATATTATATTTCCACTTTCAAATTTCAAATGAAAATGACAGCTTCAATGGAAGGGATATGAAATTAAATTAAAATGA CGTTCGTTATACTAAACATGATAATTTCCTGGGACGGGATAGGAACGGGAAATAGGGCCAATCTGTTGAACAGTATATTAAACGACCATTTTGTTTTTTG TTGATAATTTTGTTTTTCTATAAACACCATTCTGGTTTTCAGGATTTAAAGAAATTAAAATAGTAATTTTCTATGATGTCAAGAGGCCAATATTAAAAAA AGCACCCCAATTATTGTGATTCATCTTTACTTTTGTTATATTTTTTATCTCTGGGAAATAATTGGTCTACTTTATAAGATAGAAGCCCCTGCTTGCATTT AACCTGCATCTCGGCCAATCATTGTCATATAATGATGGTTGAGTAAATGTGTTTATTGATGTCTTTAAACGCTTATGAATTGACCAAGTGTCCAAGTCTT GAATTTTTCTTCTCCCATGGCTAGATGGGGCTCGTGATCCAAATTCGAGTCCAGAGTTGTGACCTTGCATCGTCTTAACATTGCAGCGTGATGGATTTAC TATCTTTCCAATCATGTAGGGTGCATTGTCAACCAACAATTCAAGAATGTTATGAAGAAGAAAAAACCAAGACATATATGCAGAACACCCATTATGATAT CCACATCTATTGGTAATGCTCACAGGATTGAAGGGATTCATAATGGCAATACAACATAATAAGAATTCCAGTAGTTGAAAAACCTTTATTAACAGATGAT AATACATCTCAAATGAAGGTGCTAAGAAGGGTGGGTTAAATGATAACTATCATCAGATTCAGCACAATGTCAAAAGTTCTGCCGCTACATATCTTGATTA GCTTAAAGTTTCCATTAGTCATCTAACAAAGTTGAAAGAAACAAATCTTGCACAAAACCAGATCTCCCAGCAGATTGTCTCATCCTTTTCTCCCTCTCTT CAACACTCAATGAAGGATCAAAACTGCAGAGAGACAGATCAAAGGGGTGATATTTAAGGGCATTCTTTAGTAAGGATTCAATACTAATGACCAGG
• Tissue: pods
• Gene name: LI_gene_178017;
• Additional information: details;

Expression of Ll_transcript_404475

FPKM

• PAB: 315.8
• PNAB: 20.2
• PS1: 41.5
• PS2: 23
• PS3: 38.7
• PW1: 49.2
• PW2: 70.5
• PW3: 71.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404475

• Blastp: Polyubiquitin 11 from Arabidopsis with 100% of identity
• Blastx: Polyubiquitin from Hordeum with 100% of identity
• Eggnog: ubiquitin(COG5272)
• Kegg: Link to kegg annotations (AT4G05050)
• CantataDB: Link to cantataDB annotations (CNT0000474)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014508705.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;