Ll_transcript_404491

• Id Trinity: TRINITY_DN50547_c1_g8_i2
• Name Transcript: Ll_transcript_404491
• Sequence: ATGATATTATGTTGAATCTTGTACAATAATTGTTTGACTATAGAATCTAGATATTGATGTGAGTTCCAAACAACCATAACACATGTGTTCTATATATTGA GGGAAAACACTGCAAAACAAAGTGGCTTCTCTCTGTCTGAGAAACAAGCATCAATATAAAACAAAGATGTAAACTTCTCTCAAGTGTTGTTTTGTAAGAT CATAGCTTCAGCAAACAAGACAGGAGACAAATATGGCAGAAGTCAGAGAAGAATCATCTTCTGAGAGTTCTATATTTTCACTAACCAATACCAAGTTCAG ATGCATGTTTGATAGATTATGCAGTTCATGGAAGAAAAGTAGCAGACCAAATGGTCGAAGAATTTTTCACAGGGATGTTGAGAAAGAAGAGTTCCAATAT GCTAGTACTCATTGTCTTTCATCCTATTACAGTGTCTTTGTTGTTAGACTAGCAATCATGGTGATGCTAGCCATCTTGATAGGGCTACTAACTATTCTGA CATGGCATTTCACAAAGATTTATACAACAAAATCACTTAATAGTTTGGCATATGGTCTGCGTTACGAACTTCTGCAACGTCCCATCTTGAGAATGTGGAA CATTTTGAATTCCACTGCTGAAATTACCACAGCCCAGGTCAAGCTTTCTCAATATGTGATCCGGCGTTACAGCAACCCTGCCTCTCAAGCAGAGCAAGTT GAGCTGTATGAAGCAATGAGGGCTGTAACATGGGCAATGTTTGTTAGTCGAAAAGCTCTCAACTCGATAACTATAAATTATAAAAATGGATTTGTCCAAG CATTCCATAGAGATCTGAAGGATAACAACACATTCTACATCTACTCTGATCTATCAAATTACTCCATAGGTTCCAGCAACTCGAATGAGATGGCTTCCTT TTCAACACATCAAGCTTGGGATGATAAAGCCATTCATGGTAACAGGTCTGCGATTTGGTACCGCGAACCCCTTGACCCTCTCACTGGTGAGAAGATTGGA AAAGCTATGCAAATTGCACCTGATGACTTGATCAACATAGCTGGCCTTTCACAGGTACCTGATGGCGTAGCTTCATGGCATGTTGCAGTGAGCAAGTTCA CAGATTCGCCTTTGCTTTCAGCGGCATTGCCGGTTTGGGACTCTTCTAATAAGAGTATTATAGCAGTTGTTGGTGTCACAACTGCACTTTACAGTGTAGG ACAGTTAATGAGAGAACTAGTTGAGTTGCACAGTGGTCATATGTATTTGACTTCTCAAGAGGGTTACTTGCTTGCAACTTCCACAAGTTCACCTCTACTC ACAAACTCAACAAAGTCTCTTAAGCTTAAGATGCCTGTCGATTGTGAAGATGATGTAATACGACTCGGAGCTGAGTGGTTACAGAGAACTTATGGTAACA ATTTTCCTGCTGGTGATGAGGTTCATGTAGAGAATGTCAAGCTAGGCCACCAGCAATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTT GGTAGGTGTTATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCCGCATTATGTATT CTAGTCATCGGATGTGTTTGCATTTTGATACTGACAAATGGAGTATCGAAGGAAATGAATCTAAGAGCAGAACTGATAAATCAACTGGAAGCAAGAAGGA AGGCAGAGGCATCAAGCAACTATAAAAGTCAATTTCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCCGTAATCGGATTGCTAGACATTCT TATATCTGATGACTGTCTAACAAATGAACAATATGCAACAGTCACTCAAATAAGGAAATGCTCAACGGCTCTGCTCCGTCTTCTTAACAACATCTTAGAT CTGAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTAGGAAGGGAACTTGAAGGCCTTGTAGATATGTTTTCTGTGCAGTGCA TTAACCATAATGTAGAGACTGTTTTAGACCTGTCAGATGATATGCCAAATGTAGTACGGGGCGATTCTGCTAGAGTAGTTCAAATTTTTACAAATTTGAT CAACAATTCAATTAAGTTTACTCCATCGGGTCACATTATGCTGCGGGGATGGTGTGAAATCCCATACAGTGATAGTCTAAGTTTTCCTCTAGAGGAGAAG AAATCATGTCGTGTACAAAACACCGGATCGAAGCAAAATGCAAACCATGCAAAGAGAATATCTAAGAAAGATATCAAAGTGAAACTTTGGTTTGAAGTTG ATGACACAGGCTGTGGGATTGACCCAAGTAAATGGGATTCAGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTAGACTGCACGGAGGCACTGG TCTTGGTCTTTGCATTGTCAGAAACATGGTTAAAAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCGGGAACACTGATGCGGTTGTGCTTG CTTCTCAGTGCACCTATAGATGTCACGGAACAACATTGTGCAATAGATTTCGCAAACAATGGCTTAGTGGTACTGCTTGCACTGCATGGAAACATGGGTC GATTTATTGCGTCCAAGTGGTTACAGAAAAACGGAGTGTGTACTATGGAAGCATCTGAATGGAATGGACTCACACATATTTTAAGGGAACTCTTCCATGC AAGAAGTTCAGTTCATAATAATGACTTTGATGCACATTATCAAGTGAATGAGGGATTGAAGTCTAAATTACTACACATACAAGATATGAGGAACCCCACT TTTGTTATTGTTGTAGACATTGACATACTGGACTTGAGCACAGATATTTGGAAGGAACAACTTAACTTCCTTTATAAGTACTTTGTTAGAGCAAAGTTTG TATGGATGCTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCAGAAGAAAAGGGCATGTAGTCATGGTCAACAAACCTCTCTACAAGGCAAAAAT TGTTCATATTTTGGAAGCTGTCATGAAGGAGAGGAATCTTGAGCTACAAAAGAAAAAGACAACTGATCAAAGTGCAACAATGAAAAGGGGTGATTTGCAT GAGTTTCTTGAGATTGATTCTACACATTTTGATGCTGTTACATCTGATGATTCTGACATATCTGAAATCAGTGGTTCTAATCCTGCAAGTGCCAGTGTAG ATAATAATTTGAGGAAAGAAGAGTTATGTCATAGCAGCCCAAATTCAAATTATGCCAGTGAAGATATTGAACTTAAACCATTGTCAACTAAAGAAATATC ATTTCCAACAGAAGCTAAAGATAGAGAATCTGAATGTGGTGAAACAGATAAAGTCAGTAGTTCAAGTAAAGTAGTAAATGGAAAGAAATCCCTTGAAGGG TTAAAGATATTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTAGCAACCATAATGCTTGAAAAGATGGGAGCTGCAGTTGTTGCTGTAGGTGATGGAC AACAAGCAGTAGATGCTCTCAACTTCAAACTAGGTGTTGAAGATTGTAGAAGGGAATCTCTCCAGAAAGAAAGAAACACAAGATCTCAAAAAGATATTTT GACATGCCCTTCATATGACTTGGTCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACAAAGGCAATAAGGAAATCAGAAGTTGGAACA GGATTGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCAAAATGCTTGGAAGTGGGAATGGATGCTTATTTAACAAAGCCAA TTGACTTCAAGAAAATGGTGTCTACCATTCTTTCACTCACTAAAAGACCATCTTCACTTCTCACATAAAATCCAACCCTACAAATGTATACAAGTTTATA ACATATTAACATCAGAAATTATAGGTTTCAATATGTGTTAGTCCAATACTTGTTACCAACTTCTATTTACATGTTGCCTAATTTAAATAAATAAACAAAG TAAGAAAAGAAGGAGTATGGGTCCCCTTCACAACAAAGCTTTATGAAGTAAGTAAAGCATCACTTTGAATTTTGATTATGAAAGAATGTAAGCATTGAGA ACT
• Tissue: pods
• Gene name: LI_gene_178023;
• Additional information: details;

Expression of Ll_transcript_404491

FPKM

• PAB: 0
• PNAB: 1.1
• PS1: 0.6
• PS2: 1.3
• PS3: 2
• PW1: 0.5
• PW2: 1.2
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404491

• Blastp: Histidine kinase 1 from Arabidopsis with 64.98% of identity
• Blastx: Histidine kinase 1 from Arabidopsis with 64.65% of identity
• Eggnog: Histidine kinase(ENOG410XT1K)
• Kegg: Link to kegg annotations (AT2G17820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444834.1)
• Pfam: His Kinase A (phospho-acceptor) domain (PF00512.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;