Ll_transcript_404503

• Id Trinity: TRINITY_DN50547_c1_g8_i4
• Name Transcript: Ll_transcript_404503
• Sequence: AAAGACTAACTATTAGACCTTTTGTTCAGAGATAATGAAAAAGCATAACCAAAACTGTGTTGATCTAAACCACTATGTTGTTTCATGCAGGTGATGCTAG CCATCTTGATAGGGCTACTAACTATTCTGACATGGCATTTCACAAAGATTTATACAACAAAATCACTTAATAGTTTGGCATATGGTCTGCGTTACGAACT TCTGCAACGTCCCATCTTGAGAATGTGGAACATTTTGAATTCCACTGCTGAAATTACCACAGCCCAGGTCAAGCTTTCTCAATATGTGATCCGGCGTTAC AGCAACCCTGCCTCTCAAGCAGAGCAAGTTGAGCTGTATGAAGCAATGAGGGCTGTAACATGGGCAATGTTTGTTAGTCGAAAAGCTCTCAACTCGATAA CTATAAATTATAAAAATGGATTTGTCCAAGCATTCCATAGAGATCTGAAGGATAACAACACATTCTACATCTACTCTGATCTATCAAATTACTCCATAGG TTCCAGCAACTCGAATGAGATGGCTTCCTTTTCAACACATCAAGCTTGGGATGATAAAGCCATTCATGGTAACAGGTCTGCGATTTGGTACCGCGAACCC CTTGACCCTCTCACTGGTGAGAAGATTGGAAAAGCTATGCAAATTGCACCTGATGACTTGATCAACATAGCTGGCCTTTCACAGGTACCTGATGGCGTAG CTTCATGGCATGTTGCAGTGAGCAAGTTCACAGATTCGCCTTTGCTTTCAGCGGCATTGCCGGTTTGGGACTCTTCTAATAAGAGTATTATAGCAGTTGT TGGTGTCACAACTGCACTTTACAGTGTAGGACAGTTAATGAGAGAACTAGTTGAGTTGCACAGTGGTCATATGTATTTGACTTCTCAAGAGGGTTACTTG CTTGCAACTTCCACAAGTTCACCTCTACTCACAAACTCAACAAAGTCTCTTAAGCTTAAGATGCCTGTCGATTGTGAAGATGATGTAATACGACTCGGAG CTGAGTGGTTACAGAGAACTTATGGTAACAATTTTCCTGCTGGTGATGAGGTTCATGTAGAGAATGTCAAGCTAGGCCACCAGCAATATTACATTGACTC ATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTTATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCCTTCAAAACATTG GTTATTCTGATATCTGCCGCATTATGTATTCTAGTCATCGGATGTGTTTGCATTTTGATACTGACAAATGGAGTATCGAAGGAAATGAATCTAAGAGCAG AACTGATAAATCAACTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAATTTCTTGCAAACATGAGTCATGAACTGAGGACACCTAT GGCAGCCGTAATCGGATTGCTAGACATTCTTATATCTGATGACTGTCTAACAAATGAACAATATGCAACAGTCACTCAAATAAGGAAATGCTCAACGGCT CTGCTCCGTCTTCTTAACAACATCTTAGATCTGAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTAGGAAGGGAACTTGAAG GCCTTGTAGATATGTTTTCTGTGCAGTGCATTAACCATAATGTAGAGACTGTTTTAGACCTGTCAGATGATATGCCAAATGTAGTACGGGGCGATTCTGC TAGAGTAGTTCAAATTTTTACAAATTTGATCAACAATTCAATTAAGTTTACTCCATCGGGTCACATTATGCTGCGGGGATGGTGTGAAATCCCATACAGT GATAGTCTAAGTTTTCCTCTAGAGGAGAAGAAATCATGTCGTGTACAAAACACCGGATCGAAGCAAAATGCAAACCATGCAAAGAGAATATCTAAGAAAG ATATCAAAGTGAAACTTTGGTTTGAAGTTGATGACACAGGCTGTGGGATTGACCCAAGTAAATGGGATTCAGTGTTTGAAAGCTTTGAGCAAGCTGATCC ATCAACTACTAGACTGCACGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGAAACATGGTTAAAAAGATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAA GGCCCGGGAACACTGATGCGGTTGTGCTTGCTTCTCAGTGCACCTATAGATGTCACGGAACAACATTGTGCAATAGATTTCGCAAACAATGGCTTAGTGG TACTGCTTGCACTGCATGGAAACATGGGTCGATTTATTGCGTCCAAGTGGTTACAGAAAAACGGAGTGTGTACTATGGAAGCATCTGAATGGAATGGACT CACACATATTTTAAGGGAACTCTTCCATGCAAGAAGTTCAGTTCATAATAATGACTTTGATGCACATTATCAAGTGAATGAGGGATTGAAGTCTAAATTA CTACACATACAAGATATGAGGAACCCCACTTTTGTTATTGTTGTAGACATTGACATACTGGACTTGAGCACAGATATTTGGAAGGAACAACTTAACTTCC TTTATAAGTACTTTGTTAGAGCAAAGTTTGTATGGATGCTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCAGAAGAAAAGGGCATGTAGTCAT GGTCAACAAACCTCTCTACAAGGCAAAAATTGTTCATATTTTGGAAGCTGTCATGAAGGAGAGGAATCTTGAGCTACAAAAGAAAAAGACAACTGATCAA AGTGCAACAATGAAAAGGGGTGATTTGCATGAGTTTCTTGAGATTGATTCTACACATTTTGATGCTGTTACATCTGATGATTCTGACATATCTGAAATCA GTGGTTCTAATCCTGCAAGTGCCAGTGTAGATAATAATTTGAGGAAAGAAGAGTTATGTCATAGCAGCCCAAATTCAAATTATGCCAGTGAAGATATTGA ACTTAAACCATTGTCAACTAAAGAAATATCATTTCCAACAGAAGCTAAAGATAGAGAATCTGAATGTGGTGAAACAGATAAAGTCAGTAGTTCAAGTAAA GTAGTAAATGGAAAGAAATCCCTTGAAGGGTTAAAGATATTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTAGCAACCATAATGCTTGAAAAGATGG GAGCTGCAGTTGTTGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCAACTTCAAACTAGGTGTTGAAGATTGTAGAAGGGAATCTCTCCAGAAAGA AAGAAACACAAGATCTCAAAAAGATATTTTGACATGCCCTTCATATGACTTGGTCCTAATGGATTGTCAGATGCCAAAGATGGATGGTTATGAAGCAACA AAGGCAATAAGGAAATCAGAAGTTGGAACAGGATTGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCAAAATGCTTGGAAG TGGGAATGGATGCTTATTTAACAAAGCCAATTGACTTCAAGAAAATGGTGTCTACCATTCTTTCACTCACTAAAAGACCATCTTCACTTCTCACATAAAA TCCAACCCTACAAATGTATACAAGTTTATAACATATTAACATCAGAAATTATAGGTTTCAATATGTGTTAGTCCAATACTTGTTACCAACTTCTATTTAC ATGTTGCCTAATTTAAATAAATAAACAAAGTAAGAAAAGAAGGAGTATGGGTCCCCTTCACAACAAAGCTTTATGAAGTAAGTAAAGCATCACTTTGAAT TTTGATTATGAAAGAATGTAAGCATTGAGAACT
• Tissue: pods
• Gene name: LI_gene_178023;
• Additional information: details;

Expression of Ll_transcript_404503

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.2
• PS2: 0.6
• PS3: 0.2
• PW1: 0.7
• PW2: 0.4
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_404503

• Blastp: Histidine kinase 1 from Arabidopsis with 65.48% of identity
• Blastx: Histidine kinase 1 from Arabidopsis with 64.9% of identity
• Eggnog: Histidine kinase(ENOG410XT1K)
• Kegg: Link to kegg annotations (AT2G17820)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444834.1)
• Pfam: His Kinase A (phospho-acceptor) domain (PF00512.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;