| Id Trinity | TRINITY_DN50552_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_402036 |
| Sequence | AAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAGAAGAGAAGAGAAGAGAGGAGAGGAGAGGAGAGAAGAGAGGAGAGGAGAGGAG AGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAGAAGAGAGACGATGGAGAGTCTGAAAGCTTCGATTCCAGAAGGCCTCAAACAAATGA TATCAGATAGCACCGTCGATAATCTTTCCACAACTTCTTCATATCTCCACCGTTTTTTCCTTCGTTTCAATCCTTTTCACCACATGATTACTGAATTGGC GGACCCAAGCTATGGTTTATGTGGTAAGAGTAAGCACGATGCTTTGGAATCTAAGCAGCTTGGTAATCAGTGTTTTTTAGACAAAGATTATCTCCAGGCT TTGAATTTCTATACTCAGGCATTGCGCAGGGCTCCTTTTGAAGATGGCGACATGGAAAATAATCTGGTTGCCACATTGTATGTCAATCGAGCTACTGTAT TGCATAAAATGAGTCTTTTGGTGGAGTGTTTGCGAGATTGCACTCGAGCTCTCCAGATATGTCCAAGCCATGCAAAGGCATGGTATAGGAGAAGTCAGGC AAATGCTTCATTGGGAAATTATAAAGACGCTATTTTTGACCTAAATGTGGCTAAAAGTATGGAATCATCAATGGGTGGGAAGAGGAAAATTGAAAGTGAA CTGAAAAGTATTTTAGACCAATGCAAGAGCACAAGTATGGCAGTAAAGCACAGTGGGAACTGCCTGAATACAGTGGATGAGATGCCCCAAATAAAGCTGA AGTCTGTCACGATTCCTGATAAAGGTAGAGGCATGGTATCATCGTGTGACATCTCACCAGGTTCTTTGGTTCATACTGAAGAACCTTCTGCTATGATCAT ATCAAAGCAATGCCGGGAAACTCATTGTCATTATTGCTTGAATGACCTACCACCTGATAGAGTTCCTTGTATATCGTGTTCAATACCACTGTATTGCTCC CAGCAATGCCAGATAAAGGCAGGCGGGAGAATGTTCAGGATTTATCCAGAAGTTCATGCCATTCTTAAAAGTTTACCCAGAGATCTTGGAGAATATGCTG CAGAAGTTATTCAAGTCAATGATTCTGAACAAGAAATTGAGAATATTTCTGAACATAAACATGAATGTCAAGGTGTAAATTGGTCTGCAGTACTGCCATC TGAAATAGTTTTGGCTGGCCGGATACTAGCAAGGCTTTTGCCAAAGAGCACATCTGAAGATATTAAAGACTTTGTAGAAGGGCTGGAGCTTTCTCATTGT TATAAACATATGCCACCTGAAAGCAAATTGGACTCACATATACATGCCATTGTATTGTTGCACTGTCTTCAACACTCTAATAGCATTGTGTTTCCCATAG ACGGAGTGTCTTTGTCACAGGTTGTCATAATTATTTCCCAAATTAAAGTGAATTGTATGACTGTTGTTCGTTTAAAGTCAATAGATGCTCATGTGCGATC AGACCAGTTTGGAGAATTTCCATCTAATGCATATTTAACTAGTAATGTGGAACAGGTACATGTTTTGCTATGAATTGCATCATTTTCCTATCTTTAATAC ACTTTTTTCTTGTGCAGCATTTAGTCATGAACATTGTCGCAAATTCTACTATAAATCTATAATAGTTCAGACTTCAGACATTGTTGGTGATGGTAATATT TTATTGTCTACGTTTGATGATTCTGAGTCATATTCTGTTGTTTCTCTCAGGTTAGAGTGGGAAAAGCTATTTATAAAACTGGCAGTTTATTCAACCATTC TTGCCAACCAAATGTTCATGCATATTTTCTTTCACGTACTCTATGTATACGAACAACAAAATTTGTAGCAGCCGGGTGTGAGCTGGAGTTGTCTTATGGT CCACAGAATGTCTGTGACCAAGCATCTGAAAAACTTAAGCTGTTAAGAGAATATTCTTATCATTATCTCAAACATGCCTCCTCACAAGAATGCTCTTTGG TTTTGAGGCATGGACAAAGCACAGGTCTTCCAAACATTCCTCCTCACAAGTATTGTAACTTGTAGCTACTACAGTACAAGCCCAGCCGACTAATACAAAA ATATTTTAACTAATCAAATAAGGAAACTAATTAGGAAAAATGTAAGTCCTAAGATTTCCCCTCAATTTGAGGATTATTTTATCCAATAACATTTACATGG TATTCTAAAATGATTCGAAGATATTGTATAGACGTTCTTACAAATCCTATTGAGAATTACTGTAAAACAAATAGCCTTGATCTTGTAGTGAGCTTTGGCA CTGAAAGAAGGAAACCTTCAATCAGAAAAGAGATACATGAGAAGTATGAGGACAGAAGGCCAAAAAAGATAGGAAATTGTAGTGACTGTTTGTTAGAAAA ACCAATGGAAGAAAAATGGTCTGGTCAGTGTAAATCTATGAATTTCGGAGAGAATTTGAGAGTAGAGAGAGAAGAATAGAGAGAAATGAAATTGTAACGG TTTTTGATTCAGTTACTAGATATTTTGATTTCATTGAATTGAATTTTACAAATGGAATCTCACTTATTTATAGTGAGATGAGAAAGGATCTAGAAGAATA CAAAGCCCAATACAAAGCAAACACACTGTTATAACAGTGTGATGTAATAGTCAGATTTTTAACGTGACGTCTTCTGTATAAGTGCCTTATTTGATTGATC ATTATACAATTCTGTTTTGCAGGTTGGGCTGTTGGTTTGTAAAGATCGCCTTGACTTGCTCAAAGATGAGTATGCCTTTCAGTGTCAGTGTACTGGTTGT TCAGAAGCCAATCTGTCTGACATTGTCCTTAATGCTTTCCATTGTGTCAATCCAAACTGTTCTGGCGCAGTGTTGGATAGCAGAGTCGTTGACTGTGAAA AGCAGAAAATCAAGCGCTTCCCTATTGCTGATGAAGCAGACAAGAACAGTGACATTTTTGAAGTGTGTATTCGTGCATTCAGCCAAAATGATGCCTCCAT TCCTATCCGACCTGGATACTGCTTGAAATGTGGTTCTTGCTGCGATTTGGAGTCTTCATATGCTGCAGTTTATAAAGCTTTAATATGCATAAAGAGGTTG CAGGATGCAATTCTGTCGAAAGAGATTTCAAATACTACTATTACAGAAGCTTCAAAATTTCTTCATTTACTGAGATCAAATTTGCATGCATACAACAAGC TTATTGCCGAGGTAGAGGACAACCTTGCCCAGGCTTTTTGTTTATTGGGAGAATTAGAGCTGTGTATGGACCATTGTAAAGCATCAATCCAGATTCTGGA AAAGCTATATGATCCTGATGATATTGTTATTGCTTATGAACTTGTGAAGCTTTCTTCCATCCAACTTTCCTTGGGTGATGCTACTGCTGTGGACAGCATA AACAGAATAGGTGATATCTTCTCACGTTATTATGGATTTCATGCAGAATTGGTCTTCCCATATCTTAGATACCTTAAGGGAGAAATTGAAAAAAATTCAG TTGAGAGTGGCTAATTGCTACTCAACAACCAATTGCTTAAGCATAGGGTGCTATGAAATGTGAACAGATTAAATGTCAGAACATTTGATGTGGAAGGTAA CTCAAAGTTTGTCTATGCAATTTTGCAGTCAATACTTTTTGTGCACAGATAATATATGGAGGCTTTGAATACCTATACTCAAGTGTGTTTTCTCTTTTGA ACTGAGAAAATTTGTTTATATTGATATATTCAAATTGAAAGGGGAGAAGATATATTTAAAGAATGTTGAAAAAATCTTAGTGGCTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178056; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402036
| Blastp | Sperm-associated antigen 1 from Homo with 34.09% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily C member 7 homolog from Dictyostelium with 32.19% of identity |
| Eggnog | repeat-containing protein(COG0457) |
| Kegg | Link to kegg annotations (6674) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437284.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |