Ll_transcript_402051

• Id Trinity: TRINITY_DN50552_c1_g1_i1
• Name Transcript: Ll_transcript_402051
• Sequence: AGGGAACATGTATAAGGTGTAGGGTGCATGTAGTGGAGAGGTATAGCAGAATTTCTAGTGGTTATGGTTGGCACATGCCATTAGGGCATCCTTCAATTTT TTTCTACATTTTTTCTGGTATTTTGTCTTTAGTCAAAGCTCTTCTCATTGCACTTTCTCTATATTGTCTTAGTGAAATATCAGTATCTATCAATTTTTAT TGTTACCAAGTTTATTTATTTGGCATTGTCTGTATGAGGACTAAAACAAACAGTTAGTTTCAATTTTCCATTAACTAATTGATTTGCTACTTGTTAAATT AATCAGTTCTTTGGTTTCAATTGCTCCTATTTTCTCTTTTCCATTCCATCTCAACTCACCTCTTTTAAATTTTATGTATTACTACTATCTATGATCTGCA GAAAGATAAACGCACAGGGAGACCGAAAATATGGTTATATAGAGACAAAGAGACTAATGAACCAAAGGGAGATGCTACTGTAACATATGAGGACCCACAT GCTGCTTTAGCTGCTGTTGAATGGTTTAACAACAAAGATTTTCATGGTAGTACCATAGGAGTTTATATAGCAGAATCAAAAAACAAGGATGACCAAACAT TCAATACAGTAGTAGAACCACTTGTTTCTGATAATGTTGGTGGAGTAGAGGAAACTCCTGCGGATGTTAATGGGGGTAGTGGAAGAGGTCGAGGTCGAAA TGAAACTTCAGGCAAAGCATGGAAACAAGAGGGTGATTGGATGTGTACAAATACAAGTTGCAACAATGTGAATTTTGCCTTTCGTGGTGCGTGCAATCGC TGTGGAACTGCTCGCCCAGCTGGCGTTCCTGGTGCTGCAGGCGGTGGCGGTCGTGGCAAGGGACGTGGTGGACAGGATGCTGGGAGTGCTGGTCGTCCAG GTGGTGGACTCTTTGGCCCCAATGATTGGGCCTGTCCAATGTGTGGCAATATCAATTGGGCAAAGCGGAACAAATGCAATATTTGCAACACCAATAAGCC TGGCACTAGCGAGGGTGGTGTAAGGGGAGGGCGAGCTGGAGGTTACAAAGAGCTTGATGAAGAAGAACTAGAGGAAACTAAGCGTCGAAGGCGGGAAGCT GAAGATGATGGTGAACTGTATGATGAGTTTGGAAATCTTAAGAAGAAATTTCGTGCCAAAGCACAACAAACTGAAGCTGTACGAGTTCTTCCTGGTTCTG GGCGTGCTAGTTGGGAGGTCGAGGAACTAGGGATTGATAGGGATGCTAGAGAAAGGAGTAGAGACAGAGGACGGGAACATAATGATGGTTCTAACAGGCA CAAAGAGCGGAATGATAAAGAGAGGCGAAGAAGTCGAAGTAGAGAGAGGGATCGGGGAAGAGATCGAGACTGGGATTATGATGATCGTGATAGAGATTAT GGTCGAGATCGGGACGGAAGTAGACGCCATTATTGAAAATAGCAACAAGTAACACAGGCGCATTGACATCCTTCAACATGTTGTTGGCTATTTACGATCC TATTTCAGTTGCTTTATATTGAATCCTTAAATTCAGAGATTGTTAGTTTTTTGGAGTGGAAACAATTTCTTTTAGGGGAGTAGCTTCTTGTTTGGGATAT CTACTTCTAGCATAATACTCGATATTAAAGAGTAAATGATATATTCTCCTATAAAATCAGTGAAGAGATCCTCCTACGTATAAGAAAGTGACACGATTGA CTTATTATAAATCAATCACAAATAATACTACCATGTGACACAGGTCATCATTTTATATGTATGGGAGGATTTGCAGCCTAATTTTATAAGAAGATATATC ATTTTCCTTATTTACCATTAAAAAGAGGAGGCACTTGTTAGCTTCATATTGGCATGGCATTACAATGTGCCAGATGAAATGTTAATACACATTTTACTTA TGATGAACCTTTTGGATGACGTAATTTCTTCCTGCTGTTGTATTTCGAAGACAATGCTGGTTGTGAAAGTTGGACAAGTTGGTTGTCAGGGTGAATCAAT TCAACATGCCGGAGTGCACCCTGGAGGAGTTAGCAGAGGTGACTGGATGATGCAGTAACAGTGTATAAAACACAGACAATCAGTGTATCTTTTTCTCTTT GAAAATTGTATCAAATAATACTATAATAAAAGAATGAAATATACATCTAAACATTTATAAACAAAAATAAATAATATGAACTACCG
• Tissue: pods
• Gene name: LI_gene_178058;
• Additional information: details;

Expression of Ll_transcript_402051

FPKM

• PAB: 0.8
• PNAB: 0.5
• PS1: 1
• PS2: 0
• PS3: 1.6
• PW1: 1
• PW2: 0.9
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402051

• Blastp: Transcription initiation factor TFIID subunit 15 from Arabidopsis with 74.14% of identity
• Blastx: Transcription initiation factor TFIID subunit 15 from Arabidopsis with 65.86% of identity
• Eggnog: Ewing sarcoma breakpoint region 1(ENOG4111Q2F)
• Kegg: Link to kegg annotations (AT1G50300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460793.1)
• Pfam: Zn-finger in Ran binding protein and others (PF00641.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;