Ll_transcript_402077

• Id Trinity: TRINITY_DN50552_c1_g1_i19
• Name Transcript: Ll_transcript_402077
• Sequence: AAAAAAATGAGAAGAATACAAAAAAAAAGGACTCAAATTTCAGTATCAAAATATAAAAAGTTCATCCCAAATTACAATAAGCCCTTCTCATTCACCCACT CCTCCTTCTCTTCTCCACGTTAGGGTTTCTATCTGCTGCTTCGTCCTATTTTCCAATTTCAACCTATCAAATTCTATCTACTTATTTCATTTCGATTTCC GATCCGCTATTCGTACTCGGGATTTTTTCCTGATTTTTTCAATCTGTTTGTTCTTTTGGATTTCACTGTAGCTCGAAATAGGCCGATAGCTGAACATCTA CAGTATCAGCAGCTTGTAGTTATGCAACAAATGAAGAAAGAAACACTTATGAACTCAACCACCCAATTCTGCCACAACCTGGCAGACCCATAGCTCTGGT GGTTCTCATTCCTTCAATTTTTGGAAATTTGGTGCCCATGGCAAGCCTTCCTGGAAAATTTGCTCCTTCAAATGGTTCTATTTATGTATGCAACTTGCCT TATGGGACTGACGAAAATATGTTGGCTGAATATTTTGGCACAATTGGATTAGTAAAGAAAGATAAACGCACAGGGAGACCGAAAATATGGTTATATAGAG ACAAAGAGACTAATGAACCAAAGGGAGATGCTACTGTAACATATGAGGACCCACATGCTGCTTTAGCTGCTGTTGAATGGTTTAACAACAAAGATTTTCA TGGTAGTACCATAGGAGTTTATATAGCAGAATCAAAAAACAAGGATGACCAAACATTCAATACAGTAGTAGAACCACTTGTTTCTGATAATGTTGGTGGA GTAGAGGAAACTCCTGCGGATGTTAATGGGGGTAGTGGAAGAGGTCGAGGTCGAAATGAAACTTCAGGCAAAGCATGGAAACAAGAGGGTGATTGGATGT GTACAAATACAAGTTGCAACAATGTGAATTTTGCCTTTCGTGGTGCGTGCAATCGCTGTGGAACTGCTCGCCCAGCTGGCGTTCCTGGTGCTGCAGGCGG TGGCGGTCGTGGCAAGGGACGTGGTGGACAGGATGCTGGGAGTGCTGGTCGTCCAGGTGGTGGACTCTTTGGCCCCAATGATTGGGCCTGTCCAATGTGT GGCAATATCAATTGGGCAAAGCGGAACAAATGCAATATTTGCAACACCAATAAGCCTGGCACTAGCGAGGGTGGTGTAAGGGGAGGGCGAGCTGGAGGTT ACAAAGAGCTTGATGAAGAAGAACTAGAGGAAACTAAGCGTCGAAGGCGGGAAGCTGAAGATGATGGTGAACTGTATGATGAGTTTGGAAATCTTAAGAA GAAATTTCGTGCCAAAGCACAACAAACTGAAGCTGTACGAGTTCTTCCTGGTTCTGGGCGTGCTAGTTGGGAGGTCGAGGAACTAGGGATTGATAGGGAT GCTAGAGAAAGGAGTAGAGACAGAGGACGGGAACATAATGATGGTTCTAACAGGCACAAAGAGCGGAATGATAAAGAGAGGCGAAGAAGTCGAAGTAGAG AGAGGGATCGGGGAAGAGATCGAGACTGGGATTATGATGATCGTGATAGAGATTATGGTCGAGATCGGGACGGAAGTAGACGCCATTATTGAAAATAGCA ACAAGTAACACAGGCGCATTGACATCCTTCAACATGTTGTTGGCTATTTACGATCCTATTTCAGTTGCTTTATATTGAATCCTTAAATTCAGAGATTGTT AGTTTTTTGGAGTGGAAACAATTTCTTTTAGGGGAGTAGCTTCTTGTTTGGGATATCTACTTCTAGCATAATACTCGATATTAAAGAGTAAATGATATAT TCTCCTATAAAATCAGTGAAGAGATCCTCCTACGTATAAGAAAGTGACACGATTGACTTATTATAAATCAATCACAAATAATACTACCATGTGACACAGG TCATCATTTTATATGTATGGGAGGATTTGCAGCCTAATTTTATAAGAAGATATATCATTTTCCTTATTTACCATTAAAAAGAGGAGGCACTTGTTAGCTT CATATTGGCATGGCATTACAATGTGCCAGATGAAATGTTAATACACATTTTACTTATGATGAACCTTTTGGATGACGTAATTTCTTCCTGCTGTTGTATT TCGAAGACAATGCTGGTTGTGAAAGTTGGACAAGTTGGTTGTCAGGGTGAATCAATTCAACATGCCGGAGTGCACCCTGGAGGAGTTAGCAGAGGTGACT GGATGATGCAGTAACAGTGTATAAAACACAGACAATCAGTGTATCTTTTTCTCTTTGAAAATTGTATCAAATAATACTATAATAAAAGAATGAAATATAC ATCTAAACATTTATAAACAAAAATAAATAATATGAACTACCG
• Tissue: pods
• Gene name: LI_gene_178058;
• Additional information: details;

Expression of Ll_transcript_402077

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.3
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402077

• Blastp: Transcription initiation factor TFIID subunit 15 from Arabidopsis with 72.96% of identity
• Blastx: Transcription initiation factor TFIID subunit 15 from Arabidopsis with 67.62% of identity
• Eggnog: Ewing sarcoma breakpoint region 1(ENOG4111Q2F)
• Kegg: Link to kegg annotations (AT1G50300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460791.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;