| Id Trinity | TRINITY_DN50552_c1_g1_i28 |
|---|---|
| Name Transcript | Ll_transcript_402094 |
| Sequence | AGAAGTTTTTTAATATAGATTTGAATCGGGATTAATAATGCAGCTCCAAAACGTTGATTTTTTTGTGGTGCAGCCGATAGCTGAACATCTACAGTATCAG CAGCTTGTAGTTATGCAACAAATGAAGAAAGAAACACTTATGAACTCAACCACCCAATTCTGCCACAACCTGGCAGACCCATAGCTCTGGTGGTTCTCAT TCCTTCAATTTTTGGAAATTTGGTGCCCATGGCAAGCCTTCCTGGAAAATTTGCTCCTTCAAATGGTTCTATTTATGTATGCAACTTGCCTTATGGGACT GACGAAAATATGTTGGCTGAATATTTTGGCACAATTGGATTAGTAAAGAAAGATAAACGCACAGGGAGACCGAAAATATGGTTATATAGAGACAAAGAGA CTAATGAACCAAAGGGAGATGCTACTGTAACATATGAGGACCCACATGCTGCTTTAGCTGCTGTTGAATGGTTTAACAACAAAGATTTTCATGGTAGTAC CATAGGAGTTTATATAGCAGAATCAAAAAACAAGGATGACCAAACATTCAATACAGTAGTAGAACCACTTGTTTCTGATAATGTTGGTGGAGTAGAGGAA ACTCCTGCGGATGTTAATGGGGGTAGTGGAAGAGGTCGAGGTCGAAATGAAACTTCAGGCAAAGCATGGAAACAAGAGGGTGATTGGATGTGTACAAATA CAAGTTGCAACAATGTGAATTTTGCCTTTCGTGGTGCGTGCAATCGCTGTGGAACTGCTCGCCCAGCTGGCGTTCCTGGTGCTGCAGGCGGTGGCGGTCG TGGCAAGGGACGTGGTGGACAGGATGCTGGGAGTGCTGGTCGTCCAGGTGGTGGACTCTTTGGCCCCAATGATTGGGCCTGTCCAATGTGTGGCAATATC AATTGGGCAAAGCGGAACAAATGCAATATTTGCAACACCAATAAGCCTGGCACTAGCGAGGGTGGTGTAAGGGGAGGGCGAGCTGGAGGTTACAAAGAGC TTGATGAAGAAGAACTAGAGGAAACTAAGCGTCGAAGGCGGGAAGCTGAAGATGATGGTGAACTGTATGATGAGTTTGGAAATCTTAAGAAGAAATTTCG TGCCAAAGCACAACAAACTGAAGCTGTACGAGTTCTTCCTGGTTCTGGGCGTGCTAGTTGGGAGGTCGAGGAACTAGGGATTGATAGGGATGCTAGAGAA AGGAGTAGAGACAGAGGACGGGAACATAATGATGGTTCTAACAGGCACAAAGAGCGGAATGATAAAGAGAGGCGAAGAAGTCGAAGTAGAGAGAGGGATC GGGGAAGAGATCGAGACTGGGATTATGATGATCGTGATAGAGATTATGGTCGAGATCGGGACGGAAGTAGACGCCATTATTGAAAATAGCAACAAGTAAC ACAGGCGCATTGACATCCTTCAACATGTTGTTGGCTATTTACGATCCTATTTCAGTTGCTTTATATTGAATCCTTAAATTCAGAGATTGTTAGTTTTTTG GAGTGGAAACAATTTCTTTTAGGGGAGTAGCTTCTTGTTTGGGATATCTACTTCTAGCATAATACTCGATATTAAAGAGTAAATGATATATTCTCCTATA AAATCAGTGAAGAGATCCTCCTACGTATAAGAAAGTGACACGATTGACTTATTATAAATCAATCACAAATAATACTACCATGTGACACAGGTCATCATTT TATATGTATGGGAGGATTTGCAGCCTAATTTTATAAGAAGATATATCATTTTCCTTATTTACCATTAAAAAGAGGAGGCACTTGTTAGCTTCATATTGGC ATGGCATTACAATGTGCCAGATGAAATGTTAATACACATTTTACTTATGATGAACCTTTTGGATGACGTAATTTCTTCCTGCTGTTGTATTTCGAAGACA ATGCTGGTTGTGAAAGTTGGACAAGTTGGTTGTCAGGGTGAATCAATTCAACATGCCGGAGTGCACCCTGGAGGAGTTAGCAGAGGTGACTGGATGATGC AGTAACAGTGTATAAAACACAGACAATCAGTGTATCTTTTTCTCTTTGAAAATTGTATCAAATAATACTATAATAAAAGAATGAAATATACATCTAAACA TTTATAAACAAAAATAAATAATATGAACTACCGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_178058; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402094
| Blastp | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 72.96% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 15 from Arabidopsis with 67.62% of identity |
| Eggnog | Ewing sarcoma breakpoint region 1(ENOG4111Q2F) |
| Kegg | Link to kegg annotations (AT1G50300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460791.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |