Ll_transcript_402054

• Id Trinity: TRINITY_DN50552_c1_g2_i1
• Name Transcript: Ll_transcript_402054
• Sequence: GCCCCAAGCCTCTCAACTTCACAACAAGATCAACAGCAAGAGTAGCAGCTACTGCTGATGGCAAAACTGAAGCACCAACAGCAAAGGATGAAGCACCAGT GGGATTCACCCCACCTGAATTGGATCCAAACACTCCAAGCCCGATATTTGGAGGTAGCACTGGAGGGTTATTGAGGAAGGCTCAAGTGGAGGAATTCTAT GTGATCACATGGGACTCACCAAAAGAACAGATCTTTGAGATGCCCACAGGTGGTGCAGCCATCATGAGGGAAGGCCCTAACCTTCTCAAACTAGCTAGGA AAGAACAATGTTTAGCTCTAGGGACTAGGCTAAGGTCCAAGTATAAGATCAAGTACCAGTTCTATAGGGTGTTCCCTAATGGTGAGGTCCAATATTTGCA TCCCAAGGATGGTGTGTACCCTGAGAAGGTCAACCCTGGTCGCCAAGGGGTTGGGCAGAACTTCAGGTCTATAGGCAAGAATGTGAGCCCAATTGAGGTC AAGTTCACCGGTAAGCAGCCCTATGATGTGTGACCTCATTCATACCCACTTCAATTTCTTATGTTATGATCACATTTATGTCCAAAAATACTAAACTCTT TTACCTATGTTTTTACTGTTTCAAAAACATATATTGGAATATCCACTAAATGTGTTAATCAGCTTGCATCAAGTTATTATAGCTTATAACCTCTTTTATT GCACTTGCATTCAGATACTTTTTTTCTTCTCCTTCTTATTAGTATTTGACCAAAAGGATGACAATAAAGGGCAAGCTAAATATAATACAGTGTGAAGCAA GTAGGAGAAATTATTGTTTG
• Tissue: pods
• Gene name: LI_gene_178060;
• Additional information: details;

Expression of Ll_transcript_402054

FPKM

• PAB: 0.7
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.2
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402054

• Blastp: Photosystem I reaction center subunit II-2, chloroplastic from Arabidopsis with 84.09% of identity
• Blastx: Photosystem I reaction center subunit II, chloroplastic from Cucumis with 94.56% of identity
• Eggnog: photosystem i(ENOG4111HAV)
• Kegg: Link to kegg annotations (AT1G03130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420801.1)
• Pfam: PsaD (PF02531.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;