| Id Trinity | TRINITY_DN50553_c1_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_402579 |
| Sequence | GTGGGGGGGGGGGGGGGAGTGGTGATGGTAGGGAGTTGCTGGCGATGGTGATGTTGGTGGGGGAGATTTGTAGTAGTATGGAGGATAATGGTGGTAGGGT TGGGATGAGTGGAAGGAGTAGGTATCTTTGTCTCTAACTTTCATCTCCACTTCAACCCTTCACCTTCTCCACAACTACTCAACCCTAACCCACCGTTTCC GTTTCTTTCCTCACCCATGGAATCATCATCGAACTTCACCCCCTTCCTTCTCTTCCTCTCCGCAACCCTCACCGTTCTCTCCTCCGTCTCCGCCAACTCC GAAGGCGACGCTCTCTACGCTCTCAAACGGAGCTTCTCCGACCCCGATAACGTCCTCCAGAGCTGGGATCCCACTCTCGTTAGTCCCTGTACTTGGTTCC ATGTCACTTGTAATCAGAATAACCGTGTCACTCGATTAGATCTTGGAAACTCTAACTTATCGGGACATTTGGTACCTGAACTTGAGAAACTGGAACATCT ACAATATCTTGAACTATACAAAAATAATATTCAAGGAGTTATTCCTCCAGAGCTTGGAAACTTGAAGAATCTTGTGAGTTTGGACTTGTATAATAACAAC ATATCGGGAATTATCCCTCCTTCGTTGGGGAATCTGAAGAATCTTGTGTTTTTACGACTTAACGACAACCGGTTAACTGGCCCAATCCCTAAGGAACTCG TTGGTCCTCCAAACCTTAAAGTTGTGGATGTCTCCAACAATGACTTATGTGGAACAATTCCTACCACTGGGCCATTTGAGCATATTCCGTTGAATAAGTA GGTCCCAAAATATCCTATCTAATTATCTCTAAGCGTGTGGCTTTCTTATTCTCCTTGTGATGCTATTCATGCCAGTTACTGCTTTCCTTTTCTTCATTTT TATACAACTGTTTTCCCGTGAGCGGAGTAATTAGCAATGAACATTTGATCCTGCTGATATGTGATGGTAATGTCTCTGCTTGCTGTTGTATACAGTTTGA TGACCTACAATTGGTAGACAATTACCATTCCTGTTGTTCAGTAATAAGAATGAAAATTTTGTTTTAATTACATTCCTGATGCAGCTACATGCTATTCGAT GAGCTGTCCTGGTAGCTGGTGAAATACATTTGTAATAATAGGAAACCATATTGGATTTTCTTGTTGCATGAAGTTATTCATAGTTGTTATTCTTTATTTT TTGCTGCATTGATTCTGAATCAATTTGAAGTTTGCCTTATGGAATCTATCTAGAGCATATTTTCAGCAAAATGGCTGTATTTTTTCCTTCCCGTTACTTA TTGCTGTTTTGTTTGAATGTTGTAGCTTTGAGAACAACCCTCGTTTGGAAGGTCCAGAGTTGTTGGGACTTGTACCCTATGCCACAAACTGCTCGTGAAC AATTCCTACCACTGGGCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_178072; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402579
| Blastp | Leucine-rich repeat protein 1 from Arabidopsis with 79.23% of identity |
|---|---|
| Blastx | Leucine-rich repeat protein 1 from Arabidopsis with 83.73% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (AT5G21090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434355.1) |
| Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |