Ll_transcript_402582

• Id Trinity: TRINITY_DN50553_c1_g3_i3
• Name Transcript: Ll_transcript_402582
• Sequence: GTGGGGGGGGGGGGGGGAGTGGTGATGGTAGGGAGTTGCTGGCGATGGTGATGTTGGTGGGGGAGATTTGTAGTAGTATGGAGGATAATGGTGGTAGGGT TGGGATGAGTGGAAGGAGTAGGTATCTTTGTCTCTAACTTTCATCTCCACTTCAACCCTTCACCTTCTCCACAACTACTCAACCCTAACCCACCGTTTCC GTTTCTTTCCTCACCCATGGAATCATCATCGAACTTCACCCCCTTCCTTCTCTTCCTCTCCGCAACCCTCACCGTTCTCTCCTCCGTCTCCGCCAACTCC GAAGGCGACGCTCTCTACGCTCTCAAACGGAGCTTCTCCGACCCCGATAACGTCCTCCAGAGCTGGGATCCCACTCTCGTTAGTCCCTGTACTTGGTTCC ATGTCACTTGTAATCAGAATAACCGTGTCACTCGATTAGATCTTGGAAACTCTAACTTATCGGGACATTTGGTACCTGAACTTGAGAAACTGGAACATCT ACAATATCTTGAACTATACAAAAATAATATTCAAGGAGTTATTCCTCCAGAGCTTGGAAACTTGAAGAATCTTGTGAGTTTGGACTTGTATAATAACAAC ATATCGGGAATTATCCCTCCTTCGTTGGGGAATCTGAAGAATCTTGTGTTTTTACGACTTAACGACAACCGGTTAACTGGCCCAATCCCTAAGGAACTCG TTGGTCCTCCAAACCTTAAAGTTGTGGATGTCTCCAACAATGACTTATGTGGAACAATTCCTACCACTGGGCCATTTGAGCATATTCCGTTGAATAACTT TGAGAACAACCCTCGTTTGGAAGGTCCAGAGTTGTTGGGACTTGTACCCTATGCCACAAACTGCTCGTGAACAATTCCTACCACTGGGCCA
• Tissue: pods
• Gene name: LI_gene_178072;
• Additional information: details;

Expression of Ll_transcript_402582

FPKM

• PAB: 339.5
• PNAB: 158
• PS1: 218.3
• PS2: 238.4
• PS3: 330
• PW1: 174.4
• PW2: 259.9
• PW3: 351.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402582

• Blastp: Leucine-rich repeat protein 1 from Arabidopsis with 79.33% of identity
• Blastx: Leucine-rich repeat protein 1 from Arabidopsis with 83.25% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT5G21090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434355.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;