Ll_transcript_403666

• Id Trinity: TRINITY_DN50554_c0_g1_i12
• Name Transcript: Ll_transcript_403666
• Sequence: AAACCTTTCTCAACCCCCTCTTCAAAACCTTTTCCTCTTGCAGTTACCGTTTCCTCCTCTCCCTCTCAAAGCCCTAAAAGAGGGGGAGCGAAACCAGATG GTTGTGTGGTCATACCCGCCAACAGCAAGGCAACTGGCGGCCACCGTTACCGTGTTTGTGATTGGAGCTTCGCTCATCAGCGTAGGAGCTTATCTCTCGT ACGCTAATATTGCTCCTCAGCAGGCTCGTGCAAAATCTCGCAGTGAAGCAATTAAAAAGCAACTCAGAAAGTTCCTCGATGATTGATGATGCTTTTTGTG ATGTTGACTGGGCCTCTAACCCAGATGACAGGAAATCTATCTCAGGGGCTTGTCTCATTGTAGGCCCAAATATTGTTACTTGGTGGTCTAAAAAGCAGCA AACTGTTTCAAGATCAAGTACTGAGGAAGAGTACAGAAGCTTAGCACTAGCTGCTCAGGAACTTATTTGGATTGAATCTCTTTTATCTGAATTAAAGTTT CCTCATCAGTCACCTCTTATTCTGTGTGACAATCTCAGTACTGTGGCCATGCCACACAATCCTGTCCTTCATCACAGAACAAAACACATTGAATTGGACC TATTCTTTGTAAGAGATAGAGTCCAATCCAAATTTTTGCAAGTCAAACATGTACCATCTGAAATGCAGACAGGAGATGCACTGACTAAACCTCTCTCTAA CACAAGGTTTATGGCTATAAGGAAGCTACTTCAAGTGGTTGAAAGGTTTTCAACTCACCCACAGCTTCAGGGGGAATATAAAGATATATTGTTATGTTAT TCTTTTGTTTAGCTTCTTGTAATAAAACTAATCCTAGTTGATCAGTTTGTTCTTTTTAGTTGCTTAATTAGCTAGTACAGTTAATGGCAGTTAGTGACAG TTACATTTAGTTTAATTCAGTTTGCTATAAATAGAAGCTAGGTATTCCCCTGTAATTGTAATCTGAAAAACTGAATCAATTCAATAACAGAGATCAGTTT TCTCTTTCCTTCTCCATCATTTTCTTTTCTTTACAAACCCTAGTCCATGAACTTTGGATAGATCTTTCTTTTTATCTCCGACATCTATCTTGAACTTCTA AGAGCGACTGTTTTTTGTTTGAATTGGTGAAACAAACAGTGTTGTCTTTCAGTTGAGTTTTGGTTTTCTGTTCTCAGAAAGCACGCCCAAGAATGTCCAT GGTCCTTTTAGGAGCTAGACATTGGTGACTTTTGGCAGTTTTATTTCTTTTCTTGAGCTGCACTTTGCTGACTCTATTTTTGGTTTCACTTGAACTTCGC AATAAAAACATTCTTACCCTTCTCATTCTTCTGAGCCTTTTTTTTCCATCAGTGCGTCGCTTCTTTGGGAAGACCTAAACTGGCAATGAGATTTTCAAGG CCATCTCCTGTGACTCGTCTAATGTTATTTGCTATATTTAGTTTGGTAGCAGATTCTTGTTGTGCTGACAGTTTTGTTCATGGATCTTATGCTGCATTTT TCTTTGACTTTACTTTTCGTTCAGGATATGCTTAACTTAATCAGTCATGTTAGGTATCAAGGCCATACAAAATAGCTGAATTCGAGATTATATTTGGGGA GGGCGTCAGTAAACTGGGTTGCATTTTAGATTGTGCAGAAATGATGGATGTTGTCTTAAAGAAAGGCTCTTGGTATAGCTATGGGGACCATCGGTTGGGG CAGGGAAGAGAAAAAGCAATACAGTATCTGAAGGAGAACACGCATCTTTTAGAAGAAATTGAAAAGGTAGTTCGATCATCCTTGTTAGATGGAACCAACC AAACAAGCCATGCATACACGAAGAATAGTCCAGTACTCTATCAAGATGATGATATTTTTAAGGAAAGTCAATGATAACCAAGCAAATTCTTGTCATGTCT GACTAGCTTGGGAGAAACACTGTGAGCAGATAAAGCTGGAAAAATGCTTTCTTCACGACAAATGAAGATGGGGTTGGCTTTGATCATTAGACCATTTTTT TTGGTTCATCCTGTTCCATTGGTAAATGTTAATGAGAAGCATGAAAAATACAGAAAAGGGTTCAATGTGTGTCAATCAAGGCATCTTGATTTCTATATTT GGTTCCTATTTACTGCCATAATTGTTTCTTATTGCATGCATTTTCTGTTAGTTTTTCCCCTTCTTTTGATCTTGTTAGTTGGGTGAGCCTACAATTGTTG AAGCTAGACCCAACACAGCTACAAAAACTGTCGTTCAGATACTCCCAGAGTTCCAGTAATCGGTTG
• Tissue: pods
• Gene name: LI_gene_178080;
• Additional information: details;

Expression of Ll_transcript_403666

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.7
• PS2: 1.7
• PS3: 1.7
• PW1: 0.6
• PW2: 0.6
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403666

• Blastp: Copia protein from Sophophora with 34.64% of identity
• Blastx: DNA repair protein recA homolog 1, chloroplastic from Arabidopsis with 76.25% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442250.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;