Id Trinity | TRINITY_DN50554_c0_g1_i15 |
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Name Transcript | Ll_transcript_403669 |
Sequence | CAAGTCTTGAATACTGGTTCAAGTGCATAGATTTGGATGGAAATGGAGTTCTGACACGAAATGAACTGCAATTTTTTTATGAGGAACAATTGCATCGGAT GGAGTGCATGGCCCAAGAGCCTGTGCTTTTTGAAGATATATTGTGCCAGATAATTGACATGATTAGATCTGAGAATGAGAGTTTCATAACTCTTCACGAC CTGAAAGGCGGGAAACTCTCAGGAAGTGTTTTCAATATCCTGTTCAATCTAAATAAGTTCATGGCCTTTGAAACTCGTGACCCATTTTTGATTCGTCAGG AACGTGAGAACCCAACATTGACAGACTGGGATCGATTTGCTCATAGAGAATATATTAGGCTTTCAATGGAAGAAGACGTAGAAGAAGCCTCCAATGGAAG TGCTGAAGTCTGGGACGAATCACTGGAGGCTCCCTTCTGAAATCTTTTATGTAAGTGCTTAAGTTGAAATGTTACTCTCTTCCTAGCGTTGTATGTGCTC AGAAATCAGAAGTCCTATTTATATTAACCCAACACTTAAAAGATGAATTCTGAAAGCTGAGGTCCTTGTTTCTTCGAACACTGTAGACTCTTACTTTCTT CATTTGTAATAATATGTTGTTACCTTTGACAATCCTTATAATGCAGGGGATGAAAAGAAATTAAAGCCCCAGAACTTGATTTATTGCATTGTTCAGAGAC GCTGGACTCTAGG BLAST |
Tissue | pods |
Gene name | LI_gene_178080; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403669
Blastp | Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma from Arabidopsis with 91.1% of identity |
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Blastx | Probable serine/threonine protein phosphatase 2A regulatory subunit B''gamma from Arabidopsis with 91.1% of identity |
Eggnog | Protein phosphatase 2, regulatory subunit B(ENOG410XRBK) |
Kegg | Link to kegg annotations (AT5G28900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452924.1) |
Pfam | EF hand (PF13202.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |