| Id Trinity | TRINITY_DN50560_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_403323 |
| Sequence | CATAAAATGGCATCTATCTTCTCACCCTTCACCACTTCATCTCTCTTTCTAACTACACTCAAGTTTAAATCATCTTCACCTTTTCTTTTTTCTTTCTCTC CTCTCATGTCTCACTCTCACACTCTCCCACGTGCCACTCTTGGCCTCACTTTCCCTTCCAACACCGATCCCCCTAAGATCTCTTTTGCTGCTAATGATGC TGACGTGGCGGAATGGAAAGGAGATATAGTTGCGGTTGGAGTAACGGAAAAGGACTTGACTAGAGATGATAAGTTGAAATTCAAGAACCCTATTTTGAGC GAGCTCGATTCGAAGCTGGGCGGTTTGTTAGGGGAGGCTTCTTTGGAAGAAGATTTTAGTGGGAAATTTGGTCAGTCAACTGTTCTTAGAATTGCGAGTG GACTTGGAATTGGATCTAAGAGGGTTGGATTGATTGGGCTTGGACAATCCGTGGCGACTTTTGCGCCTTTTAGAGGCTTTGGTGAGGCTGTTGCGGCTGC TGCGAAATCAGCTCAAGCGAGCAATGTTGCTGTTGTGCTTGCATCTGTTGATGGACTTTCCGTGGAGTCCAAGCTTAACATCGCGTCTGCAATTGCGTCT GGGGCTGCCCTGGGAACATTTGAGGACAATAGATACAAGTCTGAGTCAAAGAAATCAGCGCTTAGATCTGTTGAGATTCTTGGTCTTGGAACAGGACCTG AATTGGAGAAGAAACTTAAGTATGCAGGAGATGTTTCTTCTGGAATTGTTTTTGGAAGGGAGCTTGTGAATTCCCCAGCTAATGTGCTCACGCCAGGGGT ATTGGCAGAAGAGGCATCTAAGATTGCTTTAACATATAGTGATGTTTTTACTGCCAAAATATTAGACGTCGAGCAATGTAAGGAATTGAAAATGGGGTCC TATTTAGCTGTTGCTGCAGCCTCAGCAAATCCTCCTCATTTTATCCACCTGATTTATAAACCACCAAGTGGACCTGTCAATATCAAGTTGGCTTTAGTTG GAAAAGGTTTGACTTTTGACAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTTTGATCGAACTCATGAAATTTGATATGGGTGGTTCTGCTGCAGT TTTTGGAGCGGCAAAAGCTCTTGGTCAAATCAAACCTCTTGGAGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAAAATATGATAAGTGGAACAGGTATG AGGCCCGGAGACATTGTCACAGCTTCAAATGGAAAGACTATAGAGGTTAACAACACTGATGCTGAGGGTAGGCTTACCCTGGCGGATGCTCTGGTATATG CTTGTAACCAAGGTGTTGAAAAGGTTGTTGACCTGGCAACCTTAACTGGGGCTTGTGCAGTTGCTCTTGGACCCACAATTGCAGGTAAATAAAAACCATT ATATTTTGCATGAATTTGAGCTTCTTTAAATAAGCATATACAATCTATTTGTGAGAATCAGAAAAAGGCCCTCTATTTGGTTAGCATTGAAAGCACTTAA AATTTGTATTATATTTGGGAAATAAAGAGCTAAGCTCCTATAGCGGGTGGATCAGAAATGGATATATCTGTGAGAGATCACTGATTACTTATGCAAACTG TTGTCTTTTAAGGTGTATTTACACCCAATGATGACCCCGCGAAAGAAGTTCTTGAAGCTTCTGAAGTGAGTGGGGAGAAACTATGGAGGTTGCCATTAGA AGAGAGTTACTGGGAGTCAATGAAATCAGGAGTGGCCGATATGAAGAACAGTGGTAGTCGACAAGGTGGTGCTATTTGTGCTGCTCTTTTCTTAAAACAG GTATGTGTTTAATCATAGAAACCATGTCATTGAAATGGAAAGCATTTATTTAAGAAAACTTATTGGAGGAAAAATATGGACAATTTGTGTTTCTTAGTTG TCTGGCTTTTAATTTTATGGTCCTAATGCACATGTATGTTATGGGTTTCTTAAAAATTGGTGCGTTTGCAGTTTGTTGATGAAAAGGTTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_178132; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403323
| Blastp | Leucine aminopeptidase 1 from Arabidopsis with 74.1% of identity |
|---|---|
| Blastx | Leucine aminopeptidase 1 from Arabidopsis with 68.47% of identity |
| Eggnog | Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity)(COG0260) |
| Kegg | Link to kegg annotations (AT2G24200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415349.1) |
| Pfam | Cytosol aminopeptidase family, N-terminal domain (PF02789.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |