Ll_transcript_403311

• Id Trinity: TRINITY_DN50560_c1_g1_i3
• Name Transcript: Ll_transcript_403311
• Sequence: CATAAAATGGCATCTATCTTCTCACCCTTCACCACTTCATCTCTCTTTCTAACTACACTCAAGTTTAAATCATCTTCACCTTTTCTTTTTTCTTTCTCTC CTCTCATGTCTCACTCTCACACTCTCCCACGTGCCACTCTTGGCCTCACTTTCCCTTCCAACACCGATCCCCCTAAGATCTCTTTTGCTGCTAATGATGC TGACGTGGCGGAATGGAAAGGAGATATAGTTGCGGTTGGAGTAACGGAAAAGGACTTGACTAGAGATGATAAGTTGAAATTCAAGAACCCTATTTTGAGC GAGCTCGATTCGAAGCTGGGCGGTTTGTTAGGGGAGGCTTCTTTGGAAGAAGATTTTAGTGGGAAATTTGGTCAGTCAACTGTTCTTAGAATTGCGAGTG GACTTGGAATTGGATCTAAGAGGGTTGGATTGATTGGGCTTGGACAATCCGTGGCGACTTTTGCGCCTTTTAGAGGCTTTGGTGAGGCTGTTGCGGCTGC TGCGAAATCAGCTCAAGCGAGCAATGTTGCTGTTGTGCTTGCATCTGTTGATGGACTTTCCGTGGAGTCCAAGCTTAACATCGCGTCTGCAATTGCGTCT GGGGCTGCCCTGGGAACATTTGAGGACAATAGATACAAGTCTGAGTCAAAGAAATCAGCGCTTAGATCTGTTGAGATTCTTGGTCTTGGAACAGGACCTG AATTGGAGAAGAAACTTAAGTATGCAGGAGATGTTTCTTCTGGAATTGTTTTTGGAAGGGAGCTTGTGAATTCCCCAGCTAATGTGCTCACGCCAGGGGT ATTGGCAGAAGAGGCATCTAAGATTGCTTTAACATATAGTGATGTTTTTACTGCCAAAATATTAGACGTCGAGCAATGTAAGGAATTGAAAATGGGGTCC TATTTAGCTGTTGCTGCAGCCTCAGCAAATCCTCCTCATTTTATCCACCTGATTTATAAACCACCAAGTGGACCTGTCAATATCAAGTTGGCTTTAGTTG GAAAAGGTTTGACTTTTGACAGGTAATTAACTGTGCTACTTTCTGTTTTAAATGAAGCTAAAAAAAATAGAGCGATCAAGAAGAAATGAGATTTTCCCTT GTCTGTTATCCATGGTGTCGATTTGAGATTATAACTTTTATTGGTTATGAAGTTAAAGATTGATGACTTTGTTGTTAGATGTTGTTGATATGAGTTGCAA AGAAAATTCCTTCATTGTCTTCTTTTGTTACACTGTTGTGATATTTTATGAAATAATGAAATTGCACATACATACCATGATCTATTATCTCGATTAAATT TCTCCCCCTGAACTATCAATTAGCATATACCACCCTAATCTATCGTGAATCATCCCATTACCAATATTCCCCCGATTACACGTAAAGTTGTTGCTCTTCA TCTTTTGTGGAAGGAAAATGACTTGTCCCACTTATAATCCTTAATTTGGGAGTTATTGTTGAGGGGAAATGTGTAGTTCTAATTGCTTTTCCTATCAAAG GAGTCAAAACAAAGTCATATGATGGTTGTTTACCTTACAGTTTATGGACAATTTAACAGTTAGGGGTCTATTAGTAATAGGATTATAGATCAAGGTGGAA TGTTTTGAAATTGGTAGTTTAAGGGGAATTTCTGTTGGAGTGATAAATCAGCATGGGCAAGTGCAATTTCTCCTTTTTCTTTTGCTGTTTTCATATAACG AGCTTATATTTTTTTCTATTTGCATGTTATTAGTGGTGGCTACAACATCAAGAC
• Tissue: pods
• Gene name: LI_gene_178132;
• Additional information: details;

Expression of Ll_transcript_403311

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403311

• Blastp: Leucine aminopeptidase 2, chloroplastic from Lycopersicon with 69.54% of identity
• Blastx: Leucine aminopeptidase 2, chloroplastic from Lycopersicon with 69.67% of identity
• Eggnog: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (By similarity)(COG0260)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415349.1)
• Pfam: Cytosol aminopeptidase family, N-terminal domain (PF02789.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;