Ll_transcript_402613

• Id Trinity: TRINITY_DN50561_c1_g1_i14
• Name Transcript: Ll_transcript_402613
• Sequence: ATGATTGTTTAAGCACCTTGGGGATAGAGATGCTGACTCACTCTTGTCTTGTTTTGTTTTGTTTTGTTTACTGTTTTTCAATCTTCATCAACTGCACCAA ACATAACACATAACAAGACCAACCACCTTAACTTTAAGGTACAACTTTGAGATACCCAAAATTTCCAAATCCAAGACTCACATATCAGTAATCATGTCAT CAAATTGTGTTAAGAGATTTGGAGGAAGATGGGTTTCTTTAGTTTCACACAGAGGCTTTTCTACATCTTCTGAGCAAGGTCTTAAGTCACTGAACCTTTT TTCTGCTATTAACCAAGCTCTTCACATTGCCCTTGACACAGATCCACGTGCTTATGTATTTGGAGAGGATGTAAGCTTTGGCGGAGTTTTCCGTTGCACG ACAGGATTAGCCGATCGATTTGGTAAAAGTAGGGTTTTCAATACTCCTCTTTGTGAACAGGTATTCATGTATTTCATGTTACCTCTGCTTTTCTTTTCTT TCTCTCATTCCCATTCTCCAATGTAAATATATATAATTAAGGTTTACGAAAACATGATTCTAGTATCTCGCGAGGGAATTCTAGAAAAGATATGTTATGA GAAGATAAAAGATCCGTTTCTAGAAAATGGTTTGATGGATTCTTCCACTGAAATTGTATCCAAGAATTTGATTATGCAATTCACTGAATTTCTTCTTTTT GTTGCTAAGTATCTTTTTATTCATTTCTGTATTGTTTAGTTTTTCCTTTAGCACTGATTTAATTATCTTGTACCGAAATACTATTCGTAGGGTATCGTTG GCTTCGGCATTGGTCTAGCAGCAATGGGCAATAGAGCAATAGCAGAAATCCAGTTTGCGGATTACATTTATCCGGCTTTTGATCAGATTGTCAATGAAGC TGCAAAATTCAGATACCGGAGCGGGAACCAATTTAATTGTGGTGGTTTAACAATCAGAGCCCCTTATGGAGCTGTTGGCCATGGTGGGCATTACCACTCG CAATCGCCCGAGGCTTTCTTCTGCCATGTTCCCGGTATTAAAGTATGAATCGTTCATTTGGACTTCATAACCTTATTTTTATAGCTGCAATTTTTCTGCA CTCGAAGGAGTTACTTTGCAATGAATACTTGGATTACTTGGTGTATATGGAATATTATGTTTGAAATTTACTCTAATTTTGGCGTCGTTCGATCCATGTA GCCGATCATACCTAGCAGGATAAAGGTTTGGTTGTTGTTGTTTGTTTTTTCGGTTTGCTGGGGTAATCAATTGTATGTGCTTGCAAAATTGTTCAAAATA GTGAAAAGATTGATCCTATTAACATAAGTTATATGAAGGTGGGATAGTAGAGACAGAAAATCGTCGCGAAGTAGTGGAGTAAATTCTTACATTGGTTTGT AATTTAGTACGGCGTCTTGAAAGATAGCAGTGCTATGGTTGATAAAATACAGGCTGAAGACATCTGCATTTAAATGCAAACAACCTTAATCTGGTCGCGG TTGACAACAATGAAGTTTGGTTTAAAGTTTTACCTTCCCAAACCCCGAAATCCCGAACCGCTTGAGGTTGGAAAACTGAACCACATCCCTGATCCCACCG GTTTTCAGTTTTCCCGACCCAATCCCGCTTCATCTCCGACCCCGACACACATATAAGGGTAGTTTCGTAAAACCCTTATATATAAAAAGTCTCCACTTTA CTATAATATGTATATGTGTGTGTAATTAAGGGTTCTGGACGAGTATCACCAAATTAGAACCCGAACCTGTCGGGGATGAAAAAACAAACCCGAACCCGAA CCCAGTCAAATCCAGTTTTCCCTGGCAAACTTGGTATAGTTCGGAGGGGTACCCAAAAATTTGAGTTATGTTGCCATCCCTAATAGAATTAGGATTGTGG ATAATTAAATGAAGGAAACCGGGTAACTGAACGCCTCTCGATGGTAAGTCCGGAGAAGCATGTGGCTTAGATTGCGATAGGTGGTGTTTAAGGACTGAAA TTTGCTTTATAGGGTGCTTTGGACATTTATTGAAAAAATTAGTTTCTGATATAAGAACTTTCAGTTACATTCTGTCAAATTCATATGAGGTACATGGTTG ACACATTTTCCTTAAATCTCTTACAATCGTTTCTCTTATAGGTAGTTATTCCTCGAAGTCCGCGGCAAGCGAAAGGGTTATTACTATCTTGCATAAGAGA TCCAAATCCTGTTGTATTTTTTGAACCAAAGTGGCTTTACCGTTTGGCCGTTGAAGAAGTACCCGAGGATGAATATATGTTACCTTTATCCGAGGCCGAG GTGGTTCGGCAGGGTTCGGATATTACGCTGGTTGGGTGGGGAGCTCAATTAGCAATAATGGAACAAGCTTGTCTTGATGCTGAGAAAGAGGGAATTTCTT GTGAACTGATAGATCTGAAGACACTAATACCTTGGGATAAAGAAACAGTGGAAGCCTCAGTTAAGAAAACTGGAAGATTGCTTATTAGTCATGAAGCTCC TGTAACTGGAGGTTTTGGTGCCGAAATCTCAGCTTCCATTGTCGAACGCTGCTTCTCAAGGTTAGAAGCACCTGTTGCAAGAGTTTGTGGTCTAGACACT CCTTTTCCACTGGTTTTTGAACCCTTCTACATGCCAAACAAGAACAAGATATTGGATGCAATCAAATCAACTATAGATTATTGATGAGCTTCATCATAAC TTTTTGGCCTTTTACATGATCTTGAAATCAACATCATAATGATCATGTTATGGGCTAGAGAATCATTAGTTTGATTCAGACCATGAAGTTAGGAAAGAAA CATAAATTCATTGTGCAATTTTCTCCAAATGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_178140;
• Additional information: details;

Expression of Ll_transcript_402613

FPKM

• PAB: 4.2
• PNAB: 0.9
• PS1: 0.8
• PS2: 1.8
• PS3: 2
• PW1: 2.2
• PW2: 2.1
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402613

• Blastp: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 88.89% of identity
• Blastx: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 89.44% of identity
• Eggnog: Dehydrogenase, E1 component(COG0022)
• Kegg: Link to kegg annotations (AT1G55510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448466.1)
• Pfam: Transketolase, C-terminal domain (PF02780.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;