| Id Trinity | TRINITY_DN50561_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_402606 |
| Sequence | ATCTGATTATAAGCTCTTTATATATCTTAAATGGCAGGGCAATAGAGCAATAGCAGAAATCCAGTTTGCGGATTACATTTATCCGGCTTTTGATCAGGCA TGTTCCCTTAACATGGCTAGAAATTATTCAAAGCTTCGGTTGATAGGTAATTTCCCATTTCTTGTTTTCAGATTGTCAATGAAGCTGCAAAATTCAGATA CCGGAGCGGGAACCAATTTAATTGTGGTGGTTTAACAATCAGAGCCCCTTATGGAGCTGTTGGCCATGGTGGGCATTACCACTCGCAATCGCCCGAGGCT TTCTTCTGCCATGTTCCCGGTATTAAAGTATGAATCGTTCATTTGGACTTCATAACCTTATTTTTATAGCTGCAATTTTTCTGCACTCGAAGGAGTTACT TTGCAATGAATACTTGGATTACTTGGTGTATATGGAATATTATGTTTGAAATTTACTCTAATTTTGGCGTCGTTCGATCCATGTAGCCGATCATACCTAG CAGGATAAAGGTTTGGTTGTTGTTGTTTGTTTTTTCGGTTTGCTGGGGTAATCAATTGTATGTGCTTGCAAAATTGTTCAAAATAGTGAAAAGATTGATC CTATTAACATAAGTTATATGAAGGTGGGATAGTAGAGACAGAAAATCGTCGCGAAGTAGTGGAGTAAATTCTTACATTGGTTTGTAATTTAGTACGGCGT CTTGAAAGATAGCAGTGCTATGGTTGATAAAATACAGGCTGAAGACATCTGCATTTAAATGCAAACAACCTTAATCTGGTCGCGGTTGACAACAATGAAG TTTGGTTTAAAGTTTTACCTTCCCAAACCCCGAAATCCCGAACCGCTTGAGGTTGGAAAACTGAACCACATCCCTGATCCCACCGGTTTTCAGTTTTCCC GACCCAATCCCGCTTCATCTCCGACCCCGACACACATATAAGGGTAGTTTCGTAAAACCCTTATATATAAAAAGTCTCCACTTTACTATAATATGTATAT GTGTGTGTAATTAAGGGTTCTGGACGAGTATCACCAAATTAGAACCCGAACCTGTCGGGGATGAAAAAACAAACCCGAACCCGAACCCAGTCAAATCCAG TTTTCCCTGGCAAACTTGGTATAGTTCGGAGGGGTACCCAAAAATTTGAGTTATGTTGCCATCCCTAATAGAATTAGGATTGTGGATAATTAAATGAAGG AAACCGGGTAACTGAACGCCTCTCGATGGTAAGTCCGGAGAAGCATGTGGCTTAGATTGCGATAGGTGGTGTTTAAGGACTGAAATTTGCTTTATAGGGT GCTTTGGACATTTATTGAAAAAATTAGTTTCTGATATAAGAACTTTCAGTTACATTCTGTCAAATTCATATGAGGTACATGGTTGACACATTTTCCTTAA ATCTCTTACAATCGTTTCTCTTATAGGTAGTTATTCCTCGAAGTCCGCGGCAAGCGAAAGGGTTATTACTATCTTGCATAAGAGATCCAAATCCTGTTGT ATTTTTTGAACCAAAGTGGCTTTACCGTTTGGCCGTTGAAGAAGTACCCGAGGATGAATATATGTTACCTTTATCCGAGGCCGAGGTGGTTCGGCAGGGT TCGGATATTACGCTGGTTGGGTGGGGAGCTCAATTAGCAATAATGGAACAAGCTTGTCTTGATGCTGAGAAAGAGGGAATTTCTTGTGAACTGATAGATC TGAAGACACTAATACCTTGGGATAAAGAAACAGTGGAAGCCTCAGTTAAGAAAACTGGAAGATTGCTTATTAGTCATGAAGCTCCTGTAACTGGAGGTTT TGGTGCCGAAATCTCAGCTTCCATTGTCGAACGCTGCTTCTCAAGGTTAGAAGCACCTGTTGCAAGAGTTTGTGGTCTAGACACTCCTTTTCCACTGGTT TTTGAACCCTTCTACATGCCAAACAAGAACAAGATATTGGATGCAATCAAATCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_178140; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402606
| Blastp | 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 90.08% of identity |
|---|---|
| Blastx | 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial from Arabidopsis with 90.34% of identity |
| Eggnog | Dehydrogenase, E1 component(COG0022) |
| Kegg | Link to kegg annotations (AT1G55510) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448466.1) |
| Pfam | Transketolase, C-terminal domain (PF02780.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |