Ll_transcript_403972

• Id Trinity: TRINITY_DN50572_c3_g1_i2
• Name Transcript: Ll_transcript_403972
• Sequence: GTCCAGGCCCCTTGAGGCCTGAATTGTTAAACCCTAGTCTGAGAATGCCACACATATATACAACACAGTGCACTTTCTCCCTCTCTTGCATGATCAAGAC TCAAAATAATGTCAAAGCGAGGTAGGGGAGGATCTGCGGGCAACAAGTTCCGAATGTCGCTGGGTCTCCCGGTGGCGGCGACGGTGAACTGCGCCGACAA CACCGGCGCGAAGAATCTATACATAATTTCAGTGAAGGGGATCAAAGGTCGTTTGAACCGTTTACCTTCTGCTTGCGTTGGTGACATGGTGATGGCTACA GTGAAGAAAGGAAAGCCAGATCTGCGTAAGAAGGTTCTTCCAGCTGTTATTGTTAGACAGCGTAAGCCATGGCGCCGAAAGGACGGTGTTTTCATGTACT TCGAAGATAATGCGGGTGTTATTGTGAATCCAAAGGGTGAAATGAAAGGTATTATCTTTTCTTAGGTTATATCTCTATTTATGAATGATAGCAAAACATG AAGCCATGTTGGTATTTTGTGTTTGTGTTTCTTCATCAGTTTCAATTGGAATACACTTGTTATAATAGTCAAAGTATAGTTTTCTCAACATGTTGGTTTT TATGGTTCTTTGCATAATGGTGTCACAATGTAATTGTAGGTTCTGCTATCACTGGTCCAATTGGAAAGGAGTGTGCTGATCTGTGG
• Tissue: pods
• Gene name: LI_gene_178266;
• Additional information: details;

Expression of Ll_transcript_403972

FPKM

• PAB: 5.5
• PNAB: 76.9
• PS1: 67.9
• PS2: 42.1
• PS3: 54.2
• PW1: 60
• PW2: 37.6
• PW3: 24.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403972

• Blastp: 60S ribosomal protein L23 from Arabidopsis with 98.25% of identity
• Blastx: 60S ribosomal protein L23 from Arabidopsis with 98.25% of identity
• Eggnog: Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (By similarity)(COG0093)
• Kegg: Link to kegg annotations (AT1G04480)
• CantataDB: Link to cantataDB annotations (CNT0002435)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_007162592.1)
• Pfam: Ribosomal protein L14p/L23e (PF00238.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;