Ll_transcript_403998

• Id Trinity: TRINITY_DN50572_c4_g2_i13
• Name Transcript: Ll_transcript_403998
• Sequence: CAGCAACATTAGCAGTGCAATGTCAGCAAAAAACCAATGTTAAAAGTTTGTGAAATAACTTACCAATGACTTAAAGATTTTTCTATATGACATGACACAA TCTAATTGGCTGAGTCCGGAGATAAGATAGCATTTTGGTACAAGTGATCTCTATTCGTCGACAACATTAACTTGGACCAGACACTGTAAGGAAAATAATT ACAGTGAACATTTAAGTTCCCCACATATCTCACTTCACTATCCATGCATCAATAATACCAAATTATCAAAACCAATGGCTTCAGTTCAGTTCATGTGGTC ATGTACTCAGTTTAATATTAACCATGGTTGTATTAGAATCATAAAGCCTAATATGAAACCAAATAGGTGCAGTATGAAAAGATGTTTGGTTAGATGTGAA GGTAGCAATGATAAGGTTCCAAATGAAGAGAAAAATGAGAAGAAGAAACTGAGAGTGTTAATAGCTGGTGGTGGAATTGGAGGGCTTGTTTTGGCTCTTG CAGCAAAGAAAAGAGGACATGAAGTGAAGGTTTTTGAGAAGGATTTGAGTGCAGTAAGAGGTGAAGGTAGAGATCGTGGTGCAATTCAATTATTGAGTGG TGCACTTGCTGTGTTGGAAGCAATTGATGGGAATGTTGCAAAGCAGATAATGGAGGAAGGTTGTGTTACTGGAAATAGGACTAATGGTCTAGCTGATGGC TTATCTGGAGAATGGTTCACTAGGTTTGATTTTTTCACTCCTGCTAGAAGGAGAGGGCTTCCTATTACCCTAGTGATATGTAGAATTGCACTGCAAGATA TCTTAGTCAATGCAGTTGGTTCCAACATACTAAGAAACAAAGCCAAAGTTGTAGATTTTATTCAGGAACCTAGCAAGGTCAGAGTGGTCCTAGAAAATGG AGAGCACTATGATGGTGATATTTTAGTAGGGGCAGATGGAATATGGTCGGAAGTGCGTTCGAAGCTGTTCGGGTGGCAGGAAGCAAATTACTCTGGTTTC ACATGCTATACTGGATTAACACATTATGTACCTCCATATATTGATACCATTGGGTATCGGGTATTCTTAGGCTTGAACCAGTACTTCGTTGCCTCGGATA TTGGCAATGGTAAGATGCAGTGGTATGCTTTTCAAGGGGAGGCCCCTTCTAGCGCCCCTACTCTAGAAGGAAAGAATAAGAAGAAGAGAGTTCTTGAACT ATTTGGTAAATGGTGCAATGATGTGGTCACACTTATATCAGAAACACCCGAGCATGAAATTCTCCAGAGGAATATATATGATAGAGACATGATAAGCACT TGGGGAATTGGAAGGGTGACTCTTGTAGGTGATGCAGCACATCCCATGCAACCAAATCTTGGTCAAGGAGGTTGTATGGCAATAGAGGATTGTTACCAAT TGATTCTTGAGCTTGATAAGGTTGCTAAACATGGTTATGGTGAATCTGAAGTTATCCCTGCACTTAGAAGGTACGAGAAGAAAAGAGTGCCAAGAGTTAT GATCATGCACACTGCTACTAGGATGGCATCACAAATGGTTGTCAACTATAAGCCTTATATTGAATTCAATTTTTGGCCTCTATCAATTCTAAAAAATATG CAGATAAAGCACCCTGGCATTGTTATATCTAGTGCATTTTTGGAGTTCATTTTTCCACAATTTGCTGATTGGATGCTTGCAGGTCATGGGTTATTATGAA CCAATCAGGATTCTCTTCGGTATTAAAGAATATTTACTTACGGAGAGGATCCCTACTTCTCGTGGTGAAAATACTTATGTAACAAATTGAAAATAAAAAT GGCCTACTTTAACCTTGTGTGATTGGTTTGAGAAATTTTTGGTGTTGTTATTAAACTAAAGGCCTACTACTATCACAATTTAAATTAGTTATCTCCACTC AATCCCTATTCCAATCACTTGAGCCATGAGAGATTAAAAAAGACAAACCTTAACAAATTATCATTAGCTCCATAAAAAACACAGTTAATGTACCATACTT TCACTTAATGAAAACTATATATGAATGATAATATCTCACATTTGAATAAACTATTTAAATCCGCTAAGTTAGTAGGATGTAATGAAATGGAT
• Tissue: pods
• Gene name: LI_gene_178268;
• Additional information: details;

Expression of Ll_transcript_403998

FPKM

• PAB: 11.1
• PNAB: 28.9
• PS1: 24.9
• PS2: 24
• PS3: 28.3
• PW1: 24.3
• PW2: 45.2
• PW3: 58.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403998

• Blastp: Zeaxanthin epoxidase, chloroplastic from Oryza sativa with 56.32% of identity
• Blastx: Zeaxanthin epoxidase, chloroplastic from Oryza sativa with 55.33% of identity
• Eggnog: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654)
• Kegg: Link to kegg annotations (4335984)
• CantataDB: Link to cantataDB annotations (CNT0002155)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464986.1)
• Pfam: FAD binding domain (PF01494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;