Id Trinity | TRINITY_DN50572_c4_g2_i14 |
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Name Transcript | Ll_transcript_403999 |
Sequence | CAGCAACATTAGCAGTGCAATGTCAGCAAAAAACCAATGTTAAAAGTTTGTGAAATAACTTACCAATGACTTAAAGATTTTTCTATATGACATGACACAA TCTAATTGGCTGAGTCCGGAGATAAGATAGCATTTTGGTACAAGTGATCTCTATTCGTCGACAACATTAACTTGGACCAGACACTGTAAGGAAAATAATT ACAGTGAACATTTAAGTTCCCCACATATCTCACTTCACTATCCATGCATCAATAATACCAAATTATCAAAACCAATGGCTTCAGTTCAGTTCATGTGGTC ATGTACTCAGTTTAATATTAACCATGGTTGTATTAGAATCATAAAGCCTAATATGAAACCAAATAGGTGCAGTATGAAAAGATGTTTGGTTAGATGTGAA GGTAGCAATGATAAGGTTCCAAATGAAGAGAAAAATGAGAAGAAGAAACTGAGAGTGTTAATAGCTGGTGGTGGAATTGGAGGGCTTGTTTTGGCTCTTG CAGCAAAGAAAAGAGGACATGAAGTGAAGGTTTTTGAGAAGGATTTGAGTGCAGTAAGAGGTGAAGGTAGAGATCGTGGTGCAATTCAATTATTGAGTGG TGCACTTGCTGTGTTGGAAGCAATTGATGGGAATGTTGCAAAGCAGATAATGGAGGAAGGTTGTGTTACTGGAAATAGGACTAATGGTCTAGCTGATGGC TTATCTGGAGAATGGTTCACTAGGTTTGATTTTTTCACTCCTGCTAGAAGGAGAGGGCTTCCTATTACCCTAGTGATATGTAGAATTGCACTGCAAGATA TCTTAGTCAATGCAGTTGGTTCCAACATACTAAGAAACAAAGCCAAAGTTGTAGATTTTATTCAGGAACCTAGCAAGGTCAGAGTGGTCCTAGAAAATGG AGAGCACTATGATGGTGATATTTTAGTAGGGGCAGATGGAATATGGTCGGAAGTGCGTTCGAAGCTGTTCGGGTGGCAGGAAGCAAATTACTCTGGTTTC ACATGCTATACTGGATTAACACATTATGTACCTCCATATATTGATACCATTGGGTATCGGGTATTCTTAGGCTTGAACCAGTACTTCGTTGCCTCGGATA TTGGCAATGGTAAGATGCAGTGGTATGCTTTTCAAGGGGAGGCCCCTTCTAGCGCCCCTACTCTAGAAGGAAAGAATAAGAAGAAGAGAGTTCTTGAACT ATTTGGTAAATGGTGCAATGATGTGGTCACACTTATATCAGAAACACCCGAGCATGAAATTCTCCAGAGGAATATATATGATAGAGACATGATAAGCACT TGGGGAATTGGAAGGGTGACTCTTGTAGGTGATGCAGCACATCCCATGCAACCAAATCTTGGTCAAGGAGGTTGTATGGCAATAGAGGATTGTTACCAAT TGATTCTTGAGCTTGATAAGGTTGCTAAACATGGTTATGGTGAATCTGAAGTTATCCCTGCACTTAGAAGGTATCTTATTTGCTATCTACACAGAAAATT GTTCTATATTTCAACAAATTGCAAACTCTTCTCATATAACAAGTATCCTTAAAATTCATAGGGAATAGAGACCACCTAGACGTGTCATAAAAGATAATTA AGCCGTATCTCTTTCATGGTTAGGTCCAGAATAATCTTCCAAGTTCGAATAATCAAAGCCAATAATAAAAGAGTCATAGTATCTGTAGACCTTTTTTAAC ATCAACATAATAGTTTTATAGTCCAACAGATCAACATTGTTTATATATTCTTTCTAATTCAACACACTGGTAGGAATATGAAACATGTGGACCTATTAGG CATGAATTGTTTGTATTTGTGTAGTTATTTTAACTTTAGGTAGTTATTTAGGCAGTAACTGTGCAATTAGTTAAGCAGTTACATATCAGTATGACAGGTA TTGTCAGGGGAAACCCTGTGGAAGTTAATGTACAGTTCTTCAAATATGGCATATAAAACAGATTGTACTTAATACAATATAATTATTTCTATGCATCAAA TTCTTGAGTCCAACAATTTGGCCGGACTTGCAAGATGCCTTCGATGAGGATGGACTCGAGGGTGGTGGAATTAGATTGGCGCATGGAGAAGATGTATATA GAAAGATGCAATGTTCCAACTCTTTTTATGGAAGTAACTTAAGATCATTAGCATATGCTATGGAGAGTATGAGAAAGGACTTCACCTAAGTGGAGAACAA GGTGGGAATCTTGGATTCTCTCCTGTTTGTGTTAAACGAAATTGCAAAGTCGAACGGTCCTGTCGTGTAAGATCATAGTGCCAGGAATTCCAACCAACCA AAATCTCACACATCTATTGATGCTTGCCAATTTGATGTCCAACCAAAACAATCTGAAGAGGATACTTCAGATGTTCTTGAAAAGGCCTTAGAAGATGTCT CTGACCTTTGTGAGCATGGAAGGTTCTATTATGTATTGGTTGAGATGTCTACGGAAGAGATTATAAGAGATGTCGCGGGAAACAACATGACAGATGTTGC ACTTATCAAGGACTAGTTTCTGCATCCAACCTCATGTCATACTCTAGTGAGCATTGATATGATAGGAATACGAAATATCGGGGACCAATTCGGCATGAAT TATTTGTATTTGTGTATTTACTTTGTCTTTAAGCAGTTTATATGTAGTTAGGTAGCTAGTTTTCATGCAGTTAGTTAGTCTGCTATGTGTTTCTATGACA CTGGCTTCATCTTTTCGTTTTTTTATTCGATCTGGTGGATTAGTGCTAGTATGATTACACCTGCATCTTTTTGTCAGGTACGAGAAGAAAAGAGTGCCAA GAGTTATGATCATGCACACTGCTACTAGGATGGCATCACAAATGGTTGTCAACTATAAGCCTTATATTGAATTCAATTTTTGGCCTCTATCAATTCTAAA AAATATGCAGATAAAGCACCCTGGCATTGTTATATCTAGTGCATTTTTGGAGTTCATTTTTCCACAATTTGCTGATTGGATGCTTGCAGGTCATGGGTTA TTATGAACCAATCAGGATTCTCTTCGGTATTAAAGAAGTGAGTTTTTTTCTTTTATTTTGTCAAAAATATTATTTCATTCTATATAAAAGATATAAATAT TATACCATTTTGTTTTTTCTTGTTTTTTCCAGTATTTACTTACGGAGAGGATCCCTACTTCTCGTGGTGAAAATACTTATGTAACAAATTGAAAATAAAA ATGGCCTACTTTAACCTTGTGTGATTGGTTTGAGAAATTTTTGGTGTTGTTATTAAACTAAAGGCCTACTACTATCACAATTTAAATTAGTTATCTCCAC TCAATCCCTATTCCAATCACTTGAGCCATGAGAGATTAAAAAAGACAAACCTTAACAAATTATCATTAGCTCCATAAAAAACACAGTTAATGTACCATAC TTTCACTTAATGAAAACTATATATGAATGATAATATCTCACATTTGAATAAACTATTTAAATCCGCTAAGTTAGTAGGATGTAATGAAATGGAT BLAST |
Tissue | pods |
Gene name | LI_gene_178268; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403999
Blastp | Zeaxanthin epoxidase, chloroplastic from Arabidopsis with 57.75% of identity |
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Blastx | Zeaxanthin epoxidase, chloroplastic from Arabidopsis with 58.26% of identity |
Eggnog | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654) |
Kegg | Link to kegg annotations (AT5G67030) |
CantataDB | Link to cantataDB annotations (CNT0002155) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464985.1) |
Pfam | FAD binding domain (PF01494.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |