Id Trinity | TRINITY_DN50572_c4_g2_i3 |
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Name Transcript | Ll_transcript_403978 |
Sequence | CAGCAACATTAGCAGTGCAATGTCAGCAAAAAACCAATGTTAAAAGTTTGTGAAATAACTTACCAATGACTTAAAGATTTTTCTATATGACATGACACAA TCTAATTGGCTGAGTCCGGAGATAAGATAGCATTTTGGTACAAGTGATCTCTATTCGTCGACAACATTAACTTGGACCAGACACTGTAAGGAAAATAATT ACAGTGAACATTTAAGTTCCCCACATATCTCACTTCACTATCCATGCATCAATAATACCAAATTATCAAAACCAATGGCTTCAGTTCAGTTCATGTGGTC ATGTACTCAGTTTAATATTAACCATGGTTGTATTAGAATCATAAAGCCTAATATGAAACCAAATAGGTGCAGTATGAAAAGATGTTTGGTTAGATGTGAA GGTAGCAATGATAAGGTTCCAAATGAAGAGAAAAATGAGAAGAAGAAACTGAGAGTGTTAATAGCTGGTGGTGGAATTGGAGGGCTTGTTTTGGCTCTTG CAGCAAAGAAAAGAGGACATGAAGTGAAGGTTTTTGAGAAGGATTTGAGTGCAGTAAGAGGTGAAGGTAGAGATCGTGGTGCAATTCAATTATTGAGTGG TGCACTTGCTGTGTTGGAAGCAATTGATGGGAATGTTGCAAAGCAGATAATGGAGGAAGGTTGTGTTACTGGAAATAGGACTAATGGTCTAGCTGATGGC TTATCTGGAGAATGGTATGTTTTGTTCCTTTCCCTTTCTCTCAAACCAACGTGTTTGTTACCAACAAAGTGTTGGTCTAGTGGTATAAGGTCCCGCTAGA TCCTCTAGGATGACTGAAAGGTCAAAGGTTCGGTTCCTGTTAGTGACACTTGTTGGGAAGGCAAGTCATGCACCCCGAAAGAGGTTAGTTTTGGGATACC TCGGTAGTACAAAAAAATCAATTTGTTGTTACCATTAAATCTTTGCATTTTCTACTTAATCAATGAATAAAATGATAGAAAAGGTGATGGTGTATCTGAG TATCAGTATCAATATGATTGAAGGAAATGGCAGTGTAATGGGAATTTCTATGATACTTGATTACACTGCGGTATGTTGTGTTTACAGCAATTATGGTAAT TGTGGAAATCTGTAAGAGATATAACTGTAATTGCATAATTAGGATTGTGGTCTATTGCCCAAACTCCCAAAATCACAATATTGCGGTTGCGAAGTGCAAG TTAAAATACTCTGTTGAGTATGTGGGATTAGATTCAAAAGGGTCGCATGATATTTAGTATATTTTGTACAATTAGTTAGGTTTTAGATATCTAGTTTATA TATATACCCTTAAAATCTTTTAGAAGCATGTTAGATGTAGATTTTTGTATATTTGGTTCCCTCCAACATATTTTAATGTATTTTTATCAGCATGGTATTC AGATTTGTGAATTTCATAATAAATTATTAAAATTCTATTTAAATAACCAATATCATGAAATGCTTGTAGGGTACCATATCTAAGAAAAATAGGTAAAAGA ATTGGCCAGTCTAAGTATAATTCATATAGTTGACATGGATTTTTGGGATTTGATATGTTCAATGTTCAGTGCCTAAACTTTTTGAATGAGATCTTTTGAT AGTGATCTTGGATGACCATACACTATTTTGCATATTAGTATTGCTAACAGAGAGAGTAAGCTTGGTGTAACAGTAAGGTTGTTGCTTAGTAACCATGAGG TTACGGGTTAAAATTCTAGAAATAAACTCTTTGCATGTAGAGTAAAACTGCATATATCTATTCTCAGACCTCACTAAGTCGGAGCCTCGTGCATTGAGCC ACATTTTTTTAGTATTGCTAACAGTCATGACCATCATTTGCAACTGACTTCTTTTCACTTCAGGTTCACTAGGTTTGATTTTTTCACTCCTGCTAGAAGG AGAGGGCTTCCTATTACCCTAGTGATATGTAGAATTGCACTGCAAGATATCTTAGTCAATGCAGTTGGTTCCAACATACTAAGAAACAAAGCCAAAGTTG TAGATTTTATTCAGGAACCTAGCAAGGTTTGAGTTTCTCTAAACAACTAGTTTCGGATTGCCCGTTTTGTCATCTATAACTGTAACCAATATCGAGTACT TTTTTCTTCATTCACTGTCAGGTCAGAGTGGTCCTAGAAAATGGAGAGCACTATGATGGTGATATTTTAGTAGGGGCAGATGGAATATGGTCGGAAGTAA ATTATACCATCCTTTCCTTCTAGTTTCTTTTTTCTAATGACTCCCTTTTTCTACTTTAGTTATGTTTGCGAGTTGGATTCTGGAGAGAAATGAAAGGAAA TGGAAGGCTTCAAAGTCATCTCACGAGTATATTTCATGGCTCATAAACCTTTCCCTCCCTTCTATTACCCTCCAAAAACCAACTCGGAAATAAACCCTTA GGCATTCAATGTATTTTGTTGATTTTCTTAGGTGCGTTCGAAGCTGTTCGGGTGGCAGGAAGCAAATTACTCTGGTTTCACATGCTATACTGGATTAACA CATTATGTACCTCCATATATTGATACCATTGGGTAAGTATACTTCATTCCCATAATATTTAGCACAATTAAAGGCCTCCTTAGTTAAATAAAGAAAACTT TCAAGGTTGAAACTCATGATAGAACAATTGTTTAGGCTTAAAAAGGTGATTCTCCAAAAGTGCTTTTTGCAAAAAAGCTTGTTTGTGAGAAGTTGAAACA TTGAGCTTCCCTTTAAGTGAATTTCAGCTTGTATACCTTTGATGAACATTTGCAGTAAAAATTCAATCTAATAAGCATATGAATGGTCACATAAGCTATG AAGAATAGTCACATAAGAAGATAAAGATATCCCTCTAACACAACTCAAACCCAATGATTTTTTGTTACATTGAGCTATCATAATTCACTTCTTTATTTCT AATAGTTACTAAATTGCCCAACACTATACACCAGCAAACTCACTATGGCATTTATAACCTCTTATTTCAACTTTTGGCGATTGTTTCTTAAACATGAAGG TATCGGGTATTCTTAGGCTTGAACCAGTACTTCGTTGCCTCGGATATTGGCAATGGTAAGATGCAGTGGTATGCTTTTCAAGGGGAGGCCCCTTCTAGCG CCCCTACTCTAGAAGGTATCTTTACATGTACACTAACCAATTGCTTACAAATTTGAGCTTAATTGCGACAAGCTGATATGTCTAAGCTACTTCAGGAAAG AATAAGAAGAAGAGAGTTCTTGAACTATTTGGTAAATGGTGCAATGATGTGGTCACACTTATATCAGAAACACCCGAGCATGAAATTCTCCAGAGGAATA TATATGATAGAGACATGATAAGCACTTGGGGAATTGGAAGGGTGACTCTTGTAGGTGATGCAGCACATCCCATGCAACCAAATCTTGGTCAAGGAGGTTG TATGGCAATAGAGGATTGTTACCAATTGATTCTTGAGCTTGATAAGGTTGCTAAACATGGTTATGGTGAATCTGAAGTTATCCCTGCACTTAGAAGGTAC GAGAAGAAAAGAGTGCCAAGAGTTATGATCATGCACACTGCTACTAGGATGGCATCACAAATGGTTGTCAACTATAAGCCTTATATTGAATTCAATTTTT GGCCTCTATCAATTCTAAAAAATATGCAGATAAAGCACCCTGGCATTGTTATATCTAGTGCATTTTTGGAGTTCATTTTTCCACAATTTGCTGATTGGAT GCTTGCAGGTCATGGGTTATTATGAACCAATCAGGATTCTCTTCGGTATTAAAGAAGTGAGTTTTTTTCTTTTATTTTGTCAAAAATATTATTTCATTCT ATATAAAAGATATAAATATTATACCATTTTGTTTTTTCTTGTTTTTTCCAGTATTTACTTACGGAGAGGATCCCTACTTCTCGTGGTGAAAATACTTATG TAACAAATTGAAAATAAAAATGGCCTACTTTAACCTTGTGTGATTGGTTTGAGAAATTTTTGGTGTTGTTATTAAACTAAAGGCCTACTACTATCACAAT TTAAATTAGTTATCTCCACTCAATCCCTATTCCAATCACTTGAGCCATGAGAGATTAAAAAAGACAAACCTTAACAAATTATCATTAGCTCCATAAAAAA CACAGTTAATGTACCATACTTTCACTTAATGAAAACTATATATGAATGATAATATCTCACATTTGAATAAACTATTTAAATCCGCTAAGTTAGTAGGATG TAATGAAATGGAT BLAST |
Tissue | pods |
Gene name | LI_gene_178268; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403978
Blastp | Zeaxanthin epoxidase, chloroplastic from Arabidopsis with 58.21% of identity |
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Blastx | Zeaxanthin epoxidase, chloroplastic from Oryza sativa with 48.86% of identity |
Eggnog | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654) |
Kegg | Link to kegg annotations (AT5G67030) |
CantataDB | Link to cantataDB annotations (CNT0002036) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464986.1) |
Pfam | NAD(P)-binding Rossmann-like domain (PF13450.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |