| Id Trinity | TRINITY_DN50572_c4_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_403984 |
| Sequence | CAGCAACATTAGCAGTGCAATGTCAGCAAAAAACCAATGTTAAAAGTTTGTGAAATAACTTACCAATGACTTAAAGATTTTTCTATATGACATGACACAA TCTAATTGGCTGAGTCCGGAGATAAGATAGCATTTTGGTACAAGTGATCTCTATTCGTCGACAACATTAACTTGGACCAGACACTGTAAGGAAAATAATT ACAGTGAACATTTAAGTTCCCCACATATCTCACTTCACTATCCATGCATCAATAATACCAAATTATCAAAACCAATGGCTTCAGTTCAGTTCATGTGGTC ATGTACTCAGTTTAATATTAACCATGGTTGTATTAGAATCATAAAGCCTAATATGAAACCAAATAGGTGCAGTATGAAAAGATGTTTGGTTAGATGTGAA GGTAGCAATGATAAGGTTCCAAATGAAGAGAAAAATGAGAAGAAGAAACTGAGAGTGTTAATAGCTGGTGGTGGAATTGGAGGGCTTGTTTTGGCTCTTG CAGCAAAGAAAAGAGGACATGAAGTGAAGGTTTTTGAGAAGGATTTGAGTGCAGTAAGAGGTGAAGGTAGAGATCGTGGTGCAATTCAATTATTGAGTGG TGCACTTGCTGTGTTGGAAGCAATTGATGGGAATGTTGCAAAGCAGATAATGGAGGAAGGTTGTGTTACTGGAAATAGGACTAATGGTCTAGCTGATGGC TTATCTGGAGAATGGTTCACTAGGTTTGATTTTTTCACTCCTGCTAGAAGGAGAGGGCTTCCTATTACCCTAGTGATATGTAGAATTGCACTGCAAGATA TCTTAGTCAATGCAGTTGGTTCCAACATACTAAGAAACAAAGCCAAAGTTGTAGATTTTATTCAGGAACCTAGCAAGGTCAGAGTGGTCCTAGAAAATGG AGAGCACTATGATGGTGATATTTTAGTAGGGGCAGATGGAATATGGTCGGAAGTGCGTTCGAAGCTGTTCGGGTGGCAGGAAGCAAATTACTCTGGTTTC ACATGCTATACTGGATTAACACATTATGTACCTCCATATATTGATACCATTGGGTATCGGGTATTCTTAGGCTTGAACCAGTACTTCGTTGCCTCGGATA TTGGCAATGGTAAGATGCAGTGGTATGCTTTTCAAGGGGAGGCCCCTTCTAGCGCCCCTACTCTAGAAGGAAAGAATAAGAAGAAGAGAGTTCTTGAACT ATTTGGTAAATGGTGCAATGATGTGGTCACACTTATATCAGAAACACCCGAGCATGAAATTCTCCAGAGGAATATATATGATAGAGACATGATAAGCACT TGGGGAATTGGAAGGGTGACTCTTGTAGGTGATGCAGCACATCCCATGCAACCAAATCTTGGTCAAGGAGGTTGTATGGCAATAGAGGATTGTTACCAAT TGATTCTTGAGCTTGATAAGGTTGCTAAACATGGTTATGGTGAATCTGAAGTTATCCCTGCACTTAGAAGGTATCTTATTTGCTATCTACACAGAAAATT GTTCTATATTTCAACAAATTGCAAACTCTTCTCATATAACAAGTATCCTTAAAATTCATAGGGAATAGAGACCACCTAGACGTGTCATAAAAGATAATTA AGCCGTATCTCTTTCATGGTTAGGTCCAGAATAATCTTCCAAGTTCGAATAATCAAAGCCAATAATAAAAGAGTCATAGTATCTGTAGACCTTTTTTAAC ATCAACATAATAGTTTTATAGTCCAACAGATCAACATTGTTTATATATTCTTTCTAATTCAACACACTGGTAGGAATATGAAACATGTGGACCTATTAGG CATGAATTGTTTGTATTTGTGTAGTTATTTTAACTTTAGGTAGTTATTTAGGCAGTAACTGTGCAATTAGTTAAGCAGTTACATATCAGTATGACAGGTA TTGTCAGGGGAAACCCTGTGGAAGTTAATGTACAGTTCTTCAAATATGGCATATAAAACAGATTGTACTTAATACAATATAATTATTTCTATGCATCAAA TTCTTGAGTCCAACAATTTGGCCGGACTTGCAAGATGCCTTCGATGAGGATGGACTCGAGGGTGGTGGAATTAGATTGGCGCATGGAGAAGATGTATATA GAAAGATGCAATGTTCCAACTCTTTTTATGGAAGTAACTTAAGATCATTAGCATATGCTATGGAGAGTATGAGAAAGGACTTCACCTAAGTGGAGAACAA GGTGGGAATCTTGGATTCTCTCCTGTTTGTGTTAAACGAAATTGCAAAGTCGAACGGTCCTGTCGTGTAAGATCATAGTGCCAGGAATTCCAACCAACCA AAATCTCACACATCTATTGATGCTTGCCAATTTGATGTCCAACCAAAACAATCTGAAGAGGATACTTCAGATGTTCTTGAAAAGGCCTTAGAAGATGTCT CTGACCTTTGTGAGCATGGAAGGTTCTATTATGTATTGGTTGAGATGTCTACGGAAGAGATTATAAGAGATGTCGCGGGAAACAACATGACAGATGTTGC ACTTATCAAGGACTAGTTTCTGCATCCAACCTCATGTCATACTCTAGTGAGCATTGATATGATAGGAATACGAAATATCGGGGACCAATTCGGCATGAAT TATTTGTATTTGTGTATTTACTTTGTCTTTAAGCAGTTTATATGTAGTTAGGTAGCTAGTTTTCATGCAGTTAGTTAGTCTGCTATGTGTTTCTATGACA CTGGCTTCATCTTTTCGTTTTTTTATTCGATCTGGTGGATTAGTGCTAGTATGATTACACCTGCATCTTTTTGTCAGGTACGAGAAGAAAAGAGTGCCAA GAGTTATGATCATGCACACTGCTACTAGGATGGCATCACAAATGGTTGTCAACTATAAGCCTTATATTGAATTCAATTTTTGGCCTCTATCAATTCTAAA AAATATGCAGATAAAGCACCCTGGCATTGTTATATCTAGTGCATTTTTGGAGTTCATTTTTCCACAATTTGCTGATTGGATGCTTGCAGGTCATGGGTTA TTATGAACCAATCAGGATTCTCTTCGGTATTAAAGAATATTTACTTACGGAGAGGATCCCTACTTCTCGTGGTGAAAATACTTATGTAACAAATTGAAAA TAAAAATGGCCTACTTTAACCTTGTGTGATTGGTTTGAGAAATTTTTGGTGTTGTTATTAAACTAAAGGCCTACTACTATCACAATTTAAATTAGTTATC TCCACTCAATCCCTATTCCAATCACTTGAGCCATGAGAGATTAAAAAAGACAAACCTTAACAAATTATCATTAGCTCCATAAAAAACACAGTTAATGTAC CATACTTTCACTTAATGAAAACTATATATGAATGATAATATCTCACATTTGAATAAACTATTTAAATCCGCTAAGTTAGTAGGATGTAATGAAATGGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_178268; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403984
| Blastp | Zeaxanthin epoxidase, chloroplastic from Arabidopsis with 57.75% of identity |
|---|---|
| Blastx | Zeaxanthin epoxidase, chloroplastic from Arabidopsis with 58.26% of identity |
| Eggnog | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(COG0654) |
| Kegg | Link to kegg annotations (AT5G67030) |
| CantataDB | Link to cantataDB annotations (CNT0002155) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464985.1) |
| Pfam | FAD binding domain (PF01494.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |