Id Trinity | TRINITY_DN50576_c0_g1_i14 |
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Name Transcript | Ll_transcript_404070 |
Sequence | ACTTATCGGATTTGATAATTACATAAACATATATAATTAGAGTAAAATATGTATATAATGTTCAGTATAACATTTACATTATCTGTCATTTCATTTGTAT TATTCAATGATTGATAATATCTTTTGTTCCTCTATATATCATATATGGGAAGCTGTTTGAATCACTAGCTGTTTGAATCACGAGCATCCACAATTATGTG GACTAACTCTTCTAATAGATATTTTTTCTTACAAGACTTCTTCAATTAAAGACTTCAACTCGATATCTTGTTCAAGATAATAATATAAAAATATATAAAT TTATAGTTGGTTTTATTATCATTGATTATTATATTTTATGGATAGATGGATTTGATCACAAACTAGTTTGTTACCATTGTGCTGATTCAGCTACTTAAAA CTTATCAATCATACTTTCTTTCTTCAACGGAAAACACGATTCCAAACTAGGATGTTACAGCTTTCTATTCAACGATGTAACTAACTATCGTTACCAATCA CTAATCATTTCTTTATTTCATCAATACTATGAATTTGGATTCTGATTATTGATTTGTGTGTGTGTTGTGTTTCAGTGAAGAAGTTCAACTTTCTGATGCC TCAGATCTCTGCTTTGGGAAATTCCCATTTCTCAACATCTTCTATTAAGTGTAATTCTCTGAGGGTTCCAAATCTTATTGGAGGGAATTTTCTTGACTCA AAATCATCCACTTTCATCGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCCTTGACTACAGATGAGGAGTTCAAATCTGCTGTATCTG CAGCAAAGAAGGCATTCACAACATGGCGCAACACTCCAATTACAACACGGCAACGTGTCATGTTGAAGTTCCAGGAGCTCATACGCCGAGATATGGTAAG CAATTTAGAACAATATATGACTCTGTCCACCTGACAAATTCATTCATGATCATAGAGACACACATGCCTGCTCAGCACGCTTACTGTTAAAACTTTTTAT CATATCACTACCATGTAATTGTTTTAGGATAAACTTGCTCTGAATGTGACCACAGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTTCGTG GTTTAGGTTGGCCTTTCTAATATATTGTTTGAGAAGATTTTGTTATAAGATAATGATTGACCTCATAATTTTTGGTGTTGGAGTTCTCTGAATATTTGAA GCTATTTCATGCAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTACAGC ATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAATTTTCCCGCAATGATTCCCTTATGGATGTTCCCAGTGGCTGTTACTTGTGGTAACA CCTTTATTCTAAAGCCATCAGAGAAAGACCCTGGTAATGTCTTTTACTTATTTTCCTGTCTATGAATTATAGTCCTGGATTAGCTCCTCCATCGGAGCAT AGTGTTAAACTGTTAATAATAATAATAAAATGGGAGTCTGGTATATTTTGTCATTCAAAGCAAGGATAAGTGGTTCCAAATATATCAGCCCGAATGTACT GTGAGCAGCAGGTGTTAGAGATTTTCTGAATAAATTTGTAACCACTAACACAACCTCTAATTCAGCGTAGTAATAGGTACTTTGCACTCACTTGCCTTTT TACATGTATTGCTAACTTGTTATCAAGAGGTGCAGAGCTTTGCATATTTTTCAAATGACATGCATGCCAGAGTCATGATTTCAAGAAAGTGTTGTTGACA TTTAAATATGTTTTTTTGGCTGTGATGTACAAGTTTCTTTTTTGAAAACCCATTTCTAGATGCATAATGACACAGACTCCATTTGTTCAAAGGAATTTTT TATTGTAAATAGATACATCAACCCCTCAACCGCTGTCAGTCCTGAGTCCTGACTCTTGCTGTCTTTCATGCACTTGCATGCACAGAATTTATGTTATTTA GTCGAGGAGGAGAATGCTACTCTAGCAAGAAGAAGGAAAGCTAGTCAACACACAAGTAACATATTGGTATCTTGTGTGATAGAGAGACTATGTTTCTGCT TCACACTACTCATCTTTTAAATGAATTTCTAAACTGATACAGTTATTAGGAGCAAATTCTCTGATGTTACAATTTATCCTAAAGTTTATTTTAACTCTAT TGTTGTTGTGACTTATAAATATGGTCTTGTTTATTTATCCATCTGGTCATTTAATACTGAATATTATTAGGCGTCCAGTAGTTTTTCTTCCCTATCCCTG TAATGGTATATGCAGCATACTCCCATGACACAGTTATTAGTCGAATTCACAAGTATCCATTCATCTGTCCACTTTTATGATTTGATATTTGGGTTACTTT TGATATGGCGGAAAGAAAGAAATTTCGTTGTAATTTGACGCTGTAGCTTAACTCGGGTCCTCTTAGTAGGATAAAGTGTGGTTGTTATCTGCATCCATTG TGTTTCCAGGTTGTTCGGTATTGCTTGCAGAATTGGCACTGGAGGCTGGTTTACCTGAAGGTGTCTTAAATATAGTTCACGGAACTCACGATATTGTGAA TGCTATCTGTGATGATGAAGACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGTAAGTCATCTAATAATTGTTTGTTTGTTTTTCCACTTCAGGGAT TTTATGTGATTCCTCTTTTGTGGCCTTTAAACTACATCTCAGAAAATTGAATCATTTTTGTGGTTTGGCTGTGCTTACATAGAAAGACAGATAGGAGAGA GCGTGCGGTGCAAAAGTATCGCATATAGTAGTCCCCTATAATATTGTTATATATAATATATGATTACTTTATGGTCTTATTTTGTTTTAAAGGCTGGAAT GCATATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCAAAAAATCATGCAATTGTCATGCCTGATGCAAATGTTGATGCT ACTCTGAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACCGTTGTTTTTGTTGGAAACTCACAATCATGGGAAA ATAAACTTATTGAGCGTGCGAAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCAGATCTTGGTCCAGTCATCAGCAAACAGGCAAAAGAGAGAAT ACACAGATTAGTTCAATCTGGGGTTGAAAGTGGCGCCAGACTACTGCTTGACGGAAGAAATATAGTGGTACCAGGATATGAATCTGGCAATTTTGTTGGC CCAACCATCTTATCAAATGTCACTGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGACAGCTTGGAAGAGG CCATAAACATTGTCAACAGAAACAAGTATGGAAACGGCGCTTCTATATTTACTACATCTGGTGTTGCTGCTCGGAAATTTCAGACTGAGATTGAAGCTGG GCAGGTCGGCATCAATGTCCCTATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCTTCTTTCGCAGGCGACCTCAATTTCTATGGCAAG GCAGGGGTTAACTTTTATACACAGATTAAAACAATAACCCAGCAATGGAAAGATTCAGCTAGTGAAAGCAAGATTAACATGGCAATGCCAACCTCTCATA AATCTTGATAGCCATGTTGAATTTATTTTGTTCCTGGAACCTTTGTACTTATGGATAAGGTCAATGTGAAGGTCTCTCTAATCATGCATTTTACCCTATA GTTTATCCTTTTCATATCTCTCTCCTGTGGCCTACTAAAACAATGTTCATCCACTCGAAATTTCATATTTTAGTATAACAACAAAATAAAACAATCTTAT ATACCAAGATTCCATAAAGCAGGCTCTATAATCTCTACCCCATTTTCCTGTCAACTTTCAAGGAGTGTACCTATTCTCATTTAACATATCAATCTACAAA TTTCTCTTAATAAATATACTTCAGATTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_178303; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404070
Blastp | Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial from Arabidopsis with 80% of identity |
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Blastx | Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial from Arabidopsis with 80% of identity |
Eggnog | Dehydrogenase(ENOG410XNP1) |
Kegg | Link to kegg annotations (AT2G14170) |
CantataDB | Link to cantataDB annotations (CNT0002283) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422399.1) |
Pfam | Aldehyde dehydrogenase family (PF00171.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |