| Id Trinity | TRINITY_DN50576_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_404058 |
| Sequence | CCGATTGATTCGTCCCTTTCATTCCGTTTTATAGACACATTGATTCATGCACCACTTTATTACCATTGCTGGCATTGTGAATTAAAAACACGATTATTGG AGAATTCTTCACTTTATCCAACAACAACAAAAACACTGATTCCAAACGAGGATGTTGCAACTATCTATTCAACGAGTGAAAAAGTTCAATTCTCTGATGC CTCAGATCTATGCTTTGGGAACTTCCCATTTCTCAACAGCTGCGGACCCATCTTCCATTAAGCGTAATCCTCCGAGAGTTCCAAATCTTATTGGAGGGAG TTTTGTTGACTCAAAAGCAACAACTTTCATCGATGTTATAAACCCTGCAACCCAAGAAGTTGTTTCACAAGTTCCCTTGACTACAGATGATGAATTTAAA TCTGCTGTATCTTCAGCAAAGAAGGCATTCTCGTCATGGCGCAAAACTCCAATTACGACACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCA GAGATATGGATAAACTTGCCCTGAATGTGACCACAGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACA TGCTTGTGGGATGGCAACTCTACAAATGGGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGCGTTTGTGCT GGTATCTGTCCTTTCAACTTTCCTGCAATGATTCCCTTATGGGTAAGCTATCTTCTACCTTTTGGGTCGGTTTCTGCCTCTTCAATTAATCTTTGACCTT CTAGTTTTGGGTGCAGTGCGCATATACTTCTTACTCACACCTATAATTGTGCGGAAACATTTAGCCGGAATTATTGTCTCTCTCTCTCTCTCTCCCTCCA TATTCTTGCTATTCCTCATAGGAATGTAATGTACATAATATTGTATTGGACATGATACAATTTCTAGATGTCAATGATCTGTCTGACTGTCTGCAGATGT TCCCAATGGCTGTGACCTGTGGTAATACCTTTATTCTAAAGCCATCAGAGAAAGACCCTGGTAATATTTTCTACTTATTTTTTTTGTCTATCAATAGCCA TGAATTAGCTTTTCAATTGGACCGTAGTCTTTTCCCTATCCTGGTAATGGTATTGCAGCATACTTCTATATGACACAATTATTGGTAGAACTGAGAAGTA TGCATTCATCTGTCCACTTTATGATTTAACCTTTGGTTATATTTGTTATGGTGGAGATAAATAAACTTAGCTGTAATTGGATGCTATAGCTTAATTTGGG TCAACTTAGTGTGATAAAGCACGGGCATCATCTGAAATCAGTTGTTTTCTCCAGGTTGTTCTGTATTGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCC TGAGGGTGTCTTAAATATAGTTCACGGAACTCATGTATGTCATTCATTACCCATTTTTATTAAATTTTTGTTCTTCACAAGTTTCTTGCGATACTTAGTA TATGTTCATGGGCCTCATTTGGCATTTGGTGATTTCATCATGATAATATTCAAGTTTTAAATCTGAACATTGCACGGAGAGCATAAATAGTTGATACTAT CATAAAATTATGAATTTATTCATGATAAAACGTGTATTCCAATGGCAATTACGTCACATTACTGTGTCAATAGCTTTTCTTACTGATTGATGTTCTTTCT TCTTAATCGTATAATTGGTGACAGGATATTGTGAATGCCATTTGTGATGATGACAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGTAAGTCATC TAATAATTGTTTGTTTGTTTTTCCACTTCAGGGATTTTATGTGATTCCTCTTTTGTGGCCTTTAAACTACATCTCAGAAAATTGAATCATTTTTGTGGTT TGGCTGTGCTTACATAGAAAGACAGATAGGAGAGAGCGTGCGGTGCAAAAGTATCGCATATAGTAGTCCCCTATAATATTGTTATATATAATATATGATT ACTTTATGGTCTTATTTTGTTTTAAAGGCTGGAATGCATATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCAAAAAATC ATGCAATTGTCATGCCTGATGCAAATGTTGATGCTACTCTGAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCAC CGTTGTTTTTGTTGGAAACTCACAATCATGGGAAAATAAACTTATTGAGCGTGCGAAAGCTCTTAAAGTAAATGCTGGAACTGAACCTGATGCAGATCTT GGTCCAGTCATCAGCAAACAGGCAAAAGAGAGAATACACAGATTAGTTCAATCTGGGGTTGAAAGTGGCGCCAGACTACTGCTTGACGGAAGAAATATAG TGGTACCAGGATATGAATCTGGCAATTTTGTTGGCCCAACCATCTTATCAAATGTCACTGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGT TCTTCTTTTCATGGAGGCTGACAGCTTGGAAGAGGCCATAAACATTGTCAACAGAAACAAGTATGGAAACGGCGCTTCTATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_178303; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_404058
| Blastp | Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial from Arabidopsis with 80.54% of identity |
|---|---|
| Blastx | Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial from Arabidopsis with 80.54% of identity |
| Eggnog | Dehydrogenase(ENOG410XNP1) |
| Kegg | Link to kegg annotations (AT2G14170) |
| CantataDB | Link to cantataDB annotations (CNT0002283) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422399.1) |
| Pfam | Aldehyde dehydrogenase family (PF00171.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |