| Id Trinity | TRINITY_DN50579_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_403788 |
| Sequence | ATTAGCGGTCCAGTCCTTGCAGACTTTAATTTGACCCTCACTACTAAACAATTCCACCAATGACACAACCCTTCTTACGGATGGAGATCACCTGTTTCCA ACGGTATCTCATACCCTGTCTCATGCCAATCATATATTTACGACACCGTCCTCTTCTCACAAGCTTTTCAACGCCCACACCCTTCATTTCTTTTACACTC ACAATCACACACTACATTTCTCTTACACTCACAACCACACTTCATTTCTCTTACACTCACAAACACACACTGGAACCAAACCATGGGGTGCAACACCTCA AAACTTGACCGTCTTCCCGCGGTGGCTCTTTGCCGTGAACGTTGCAAATTTATAAACCAAGCACTTAGCCAAAGCTACGTCCTCGCCGATGCACACGTTG CACACATGGAATCTCTCAACACACTCGCTTCTTCTCTCGCTTCTTTCTTAAACCAATTTCAACACACTGTCTCTATCAACGATATCAAATCACGCTCTTC CTCTTTCACTTCTGACTCACGTGATGATGCTCACGTGCATTTGCATTCTGATTCTGAACTCGAAGAAGAGGATAATAGTAATAGTAATAATAATAATAAT AATAAGAATAATAACAACAATGGAGATAAAGAATTATCTTCTCGTCATGATGTAGCGTTCATGAATTACGTTCCGTTTTCACCGCCTCCTCCGACTCACG GTGGCTATTATGGTTCAAAATCATCGCCGCCGCCGCCGCCACCTCCGAGCTTCTCAGCCTGGGATTATTTCAATTTGTTTGAACCTGTCCATAGATCATA TGAAATGCCGTACAATCCGAGTCATGATAGTTTCCGTGATGAAGTAACAGAGGAGAAAGATAAGAGAGTGGTTGTGAGTGAGGAGGCTCAGAAAGTTAAG GAAGATGATTCGAATGAAAAGAATTTAGTATCTGAGAATGAGGTTCAAGAATTAGAGAAGTGTAGCAGCATCAACTCCGTTAAAGCTGAATCGAAGAAAG GTTTATTATGTGAGGCAGTGAAAGAGATTCAGATTCTGTTTGAGAAAGCATCTGATTCTGGTAAACCAATTTTGGAAATGCTTGACGTTGGAAAACTCTG TTACAATTCAAAATTTGCCTTCAACCAAGTTTCTTGTAAGGTGAAGCATGTGATTACTCCGTCAATTTCATTCTTGGTTAGACGGAGAAAGGGAATGGAG TATGAAGAAGTTGATAGAGACAATGGCCATAGCTATGGGAATCTTTGCTATACTTTGAAGAAGCTATGCATGTGGGAGAAGAAGTTGTATCATGAAGTCA AGGCAGAGGAGAAATTGCGCATACTTCATCAGAAGAAGTGTAGCCAGTTGAAACGTATGAATAAAAAAGGTGCAGATGCTCAGAAAGTTGAAGCTGTTCA AACTTTGATTGGTATATTAGCAACTAAAATGAAAATTTCTATCCAAGTAGTTGACAAGATATCTATTACCATAAGTAAGTTGAGGGAAGAAGAGTTATGG CCACAGATGAACAAGTTTATTCACATGTTTCATAAAATGTGGGAAGATATGCAAGAATGTTATAGTTGCCAGTATAAGGAAAATGCTGAACTCAAAGCTT TAGATGCCTCTACATTCAACAGAAAGCTTAGCAATGATCAAATTGATGCAGCAATAAAACTCAAATCTGAGCTACAGAATTGGAATTTAAGCTTGTCAGA TTGGATTCATGCCCAAATATCCCATGTGAAAGCCTTAAATGGTTGGCTAGTAAGATGTCTAATGTATGAGCCTGAAGAAGTACCCGATGATTCAACTCCT TTTTCTCCGGGCAAGATTGGTGCACCACCTGTGTTTGTGATCTGTAACAAATGGTCAAGGTTAGTGGATAATATCTCAGAGAAGAATGTAATGGAAGCAG TAAATGGATTTATGCTAAGAATTAGTGATCTCTTGGAAAAACATATTCTAGACCTTCAACAAGAATTAACATTGGACAAAGAATTGGAGAGAAAAGTGAA AATCTTGGAGAGGCATGAGCAAAAGATGCATAAAGTGGTGCAGGCTCGAGAGAGAAAAATGGTTCCAATTGTTAGAGAAGAGAGTGAAGCATTGTTACAA GGGGGTGCTGTGCATCATGGTGATTTTGTTGATAATAATAGCATGCAATCAGATTTGGAACAGATTTTTAGTGCCATGGAGAGCTTCACTGCCTCAAATG CTCACTTATATGAAGAACTTTGCCAACAAATTAAGTCACAGGGCATTGTTTTGGGAGATTCCAACAAAATCTACTAGTTTTGTAGTACATTTTTTATTGG ATGATTTATGCAGGAATGAGGTTCTTCAAATTTTCTGAGCTTAACTTTTCATGTAATGCAGATATCTGGTGAATCTCCTCCAAACAAAATAATGCAATTT CAATGCTGAAGTGTATGGATTTGGAGTATTTATTTTCACTCTTATTTTATTCCTTTTTAAATAACTCAGAAATTATTGGCATATGAGTAGAGATTGGAGT GAAAATAGTGGGGTAAAATGATATACAATTCTAATTCAATTTTCACACTCAAACCCCACATGTTTTTTTATTTTATTTTTTACATTCTGAATTTGGCAGT TCAGAATACATTTATTTTTTATTATCTTTTAATACTTTGATGGGGGTAGTAGGAATGTTTATTCTTAAAAAACATAATGCATTTCACGACTAAGCTTAGA ATGCATTCCAATACTAAGTTCAGAATGCATTTTTACATTCTAATGGGGTCTAATTGGAATGCTTTATATTTTAAAGAAGAGCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_178323; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403788
| Blastp | Nitrate regulatory gene2 protein from Arabidopsis with 24.89% of identity |
|---|---|
| Blastx | Nitrate regulatory gene2 protein from Arabidopsis with 26.82% of identity |
| Eggnog | Protein of unknown function (DUF632)(ENOG410YACB) |
| Kegg | Link to kegg annotations (AT3G60320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438088.1) |
| Pfam | Protein of unknown function (DUF630) (PF04783.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |