Ll_transcript_402750

• Id Trinity: TRINITY_DN50587_c3_g3_i13
• Name Transcript: Ll_transcript_402750
• Sequence: TGGCGGCTTTTGTTTTCAGTATTGGTGAGTTTGATTGATTGGAGGATATGGAAACATTAGAACTAATAGATGCTCATCAAACTCAGTCATCATCATCTTC ATCTTCTTCCATTGATAGCAGCAACCACCCTTCTAAGTCACCACCACCCTCTTCATCTATGTGCCTCTCACGTGCCTGCAGAAGATGTAGCACCACCAAA AACAATGACCTGAGCACTGATCTCAGACTTGGTCTCAGCATCTCTCAATCTTCTCATTCTGAATTAGCATTCAATTCAACACCAAGGGAACAAACTTATG ATTGGCCACCAATAAAATCCATATTGAGGAGCACCCTTGTTGAGAAACAAAACCAGCATAGACCCTCTTTGTTTGTCAAAGTCTACATGGAAGGCATTCC CATAGGTAGAAAGTTGAATCTGCTAGCACACCATAGCTATGATGGACTTGTAAAAGCTCTTGGTTATATGTTTAGGATCATCATTCTTTGATCAAGAAGG GGATTGGATGATGGTTGGAGATGTACCATGGGAGTAAGTGATATAATACCACAAAGCCAAACTATTAGGCTGTGTTTGCGAGTTCAGTTTTGCATATGAA TTAAGGGAAAGTGAAGGTTTCAGAGACACCCGATGAATGATGTTCTTGACTACTGTGAAGAGGTTGAGGATCACAAGAGGTGACAGATGCTAGTTATTTT AACAATGCATACAATCTCTCTCCACACAAGCACCTTCTCAATTTTCACTGTTCATAAAGTTTTGTCCTAGT
• Tissue: pods
• Gene name: LI_gene_178387;
• Additional information: details;

Expression of Ll_transcript_402750

FPKM

• PAB: 0.7
• PNAB: 0
• PS1: 1.6
• PS2: 1.2
• PS3: 1.2
• PW1: 0
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402750

• Blastp: Auxin-responsive protein IAA31 from Arabidopsis with 51.25% of identity
• Blastx: Auxin-responsive protein IAA8 from Oryza sativa with 41.23% of identity
• Eggnog: Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations(ENOG410YIRA)
• Kegg: Link to kegg annotations (AT3G17600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419906.1)
• Pfam: AUX/IAA family (PF02309.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;