| Id Trinity | TRINITY_DN50587_c3_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_402738 |
| Sequence | CAGTGCTATTGAGCCAAACCCTTTGGCCCATTTACTATTTAATATTCGAAAACATGATGATGTGAATACATCAGCAATGGAATGCAGAAGTGATTAAAAT AAAATAATGATCTTCCAAAATTTAAATAAGCAGAAAAAGGGGTGGAGGATCATTAAGACTTTTAATAAAATAAACAACTTTTCTAGGTTCCAACCAACCA AAACTTCAAAATAAGTAATTAATTAAAGACCATGTAACTTAGAACTTGTGAACATGTCACCCACCCTCATGGCAAATCAAAACTAACGAGAGTCTTGCTC AATGTCTCACTTTGCTTTTGCTTTTGCTTCTCATTCTCTCTCTCCCTTTTTTATTTTTATAATTGGAGTGTTTAAAGTATAGTTTTTATGCTATATATAT ATATATATTATAAGTAGCCTAAGGTGGCTGGTTTTCTTTTCAGTATTGGTCATTTTCATTGGTTTGGGGGATATGGAAACATTAGAACTAATTGATGCTC ATCAAACTCAGTCATCATCATCTTCATCTTCTTCCATTGATAGCAACAACTACCCTTCTAAGACACCACCACCCTCTTCCTCTTCATCTTTGTGTCTCTC AGGTGTCTGCATAAATATTGGTAGCACCAAAAAAACTGATTTAAGCACTGACCTCAGACTTGGTCTTAGTATTTATGAATCTTCTCAATCTGAATTAGCT TTCAATTCTACCCCAAGGGAGCATAGTTATGATTGGCCACCAATTAAGTCCATATTGAGGAGCACCCTTGTTGAGAAACAAAACCAGCATAGACCCTCTT TGTTTGTCAAAGTCTACATGGAAGGCATTCTCATAGGTAGAAAATTGAATCTGATGGCACACCATAGCTATGATGGGCTGGTAAAAGCTCTTGGTCATAT GTTTAGGACCACCATTCTTTGTAAGTTTTGAAATTTTCACAAAATTATTTCCATTCTGCAGTTTCTTTTATTTTAACAAGGGTTCTATTTATGAGATCAA ATTGTTTCTTTTACAGACCCTAACTCTCAACCAATCAATTATGGGAATTTTCATTTTCTAACTTATGAGGATAAAGAAGGGGACTGGCTAATGGTTGGAG ATGTACCATGGGAGTAAGTGATATATATACCTTAGTTCTACTATACAAGAAATAAAACTACGATCTATACACAGATACCATCCATCATTTGTTGGTATTT CTTTTTCCTGAAGAATTGATGATGATCGAAAATGAATAGTGGATAATGGATTGACAATGTATAAAACTTTTATATTATCAGTCGATACATCTTTTTTTCT AGAATTAAATGTTATCAGCAATATGGATATGGGACTCCTCCATTTTCAGAATTTTAAAAGTTTTTCATTGTATTTAACACAGGATGTTCTTGACTAGTGT GAAGAGGCTGAGGATCATAAGAGCTGACAGATGCTAGTTATTTTGATAATGCACACAAGAACCTCCTCAATTTTCATTGTCTATGAAGTTTTGTCCTAGT AAATACTTAGTCAGTGGACTAAACCAGTAGAAGTTCCAAACAAACAATGGCATCCATGATTATTATATGAATATGATAGCAATATACACCCAAAAGCATA GATTTATAGCTTCTGACCAAATTGTTCAATTCAATGCATATCTATAGTGGTTCTTAGTCTCTCATTTTATGACAAGAAGTCTTCTAAATTACCACCTTGT TTAAGAGCTAGCTCAATTCTTTTGTAGTCATTTGATATATACTGCATTTTCCTTTAAAGGAACTCACCTACTAGTTAGAGTGTTGAATACTCAACTGCAC GTGTTGCTCAAAATTTATCAAAAGCTAGTAGTGAAACAATGAAAAGCAGGTACAATTTTCCTAAGTTCTCATTAGGTGCTCTTTTTTTCTTTGCTTTTGA TGTGCTTAACTTTGTTGGGTACAACATAATAATAATAATGCTTATGGTCTCCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178387; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402738
| Blastp | Auxin-responsive protein IAA31 from Arabidopsis with 53.09% of identity |
|---|---|
| Blastx | Auxin-responsive protein IAA31 from Arabidopsis with 40.94% of identity |
| Eggnog | Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations(ENOG410YIRA) |
| Kegg | Link to kegg annotations (AT3G17600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463380.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |