| Id Trinity | TRINITY_DN50592_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_402487 |
| Sequence | GTTGAGAAAGTATGACCCCTTATTTATATATTGGAGGGGCACAAAGTGAGAGGGTAGAGTTAGGGTGATTGTGAAACCACACTCCGTTTCAGAAAGAGAA GCTGTTGATGCTCCACAATTAACCCTAATCTCTCTCTCTCTTCAATTTTGATTCATATCAAAATATTATTCTCACGCTCTGACTTTCACACACCCTTCTT ATGCTTCTTCATTCACTTCCCTCTCTCTCTCTCTCTAACATGAATGAGGCTGTGACGATGCTTTCGGAGTGTGGGAACTATGGGTTGTCGCCGTTAAGCA ATCGTCGCCGGTGGCATCTATGCTATCCATGGTGGTGTTGTTGCTTCTCGACGGCTTATCCTTTTTTAGTGCCAAAAAATCTGAGCCTCACTCAAAAAAC TATTTCTATGCCGTGTTTTTCTTAGTGCCATGTTTGGAGTGAGAGATCGGAAAACGTTTTTCCGATACTACATTCTCCCTCTCTTATTCCATACATAATC GATTCAACATAGTGGGCAATGCCAATATGAACAGAGTTGATGATACATGTAGTGATACAAAAAGTAGGACAATAGATGTTCTCTCGAATGAATGGCTGTC ATGGTCTTATGTTACAAACTGAAGTATCACATGAGATGGTGGATAAAAATTGAAGATATAGAAGGTCCATGCCAAGTTTGAATAAAATTAATGACTAGTA GAAAGCATAGCAAAAACCAATACTGCTACAAGGGACAGAGCAATATTGGAAACACTTTCTGGGGCAGTTGAAGAGGGTGGAACTGCAGCAGCTGAAGCAG CAGGCACATCTTTAGTCACCTTAACCACTGCCGGAAGAGGTGGATCAACAACATTTGCAACCTCGAGAGGTGGAAGTGGTGAACCTTCTGGTGGTAATAT TTCAACTGGAATAGTACTCAATAGTTCACCAGGTTGAGCTGGTAAGATGGATAATCTAAGAAAGCTGAAGAGATCAGAATTACTTACTGAGATATCTACT TGCAGTGGCAGGAAAATCGGTCACGAATCCATCAACTCTAGCAGTTTGGACATAAGTAGCAATCTCAATATTAGGATCTGACCAATAGTCAAAGGCCAAG GATGTGTATTCATTTCTGAGAGAATGGACGAATACTGTGAGATTTGCATCATGCAACTCTTTAGCAACATTTGTCATCCCTGATAACACGGAAGCAGAAG TCACTTTAATAAGAGAGGTTTTGGGAAGATTCACTGCATTTGCATGCTTCTTAATTTCATCAACAGCCGGTCTTGGTGCATCGCCTATTATCTCACCGAT ATACAACACCCTTTTATATGCTGGGATATTCTTAAACTTAGAAAGCACTGAAGTATCATCTGATTGGATCAGGACTTGTTGTGTGGATTGCTTATCAAAG GTTGCATTGCTTAGGGCAGTGCTGACAGCACCTACAATGTCAAGACCCTTCTTTGATGCAAGGTAGGCAGCATTCTGTGAGACAAATAAACACATTTAGA AGTAGTAGCAAATTTTCAAATAGAAGCACTATAGGGAGTTGAGGATGCTACTCACCGATATGTTGACCAAAGTGCCAGTAACTGCCTTAGCTTTGGCTAA TTCCAAAAATTCCGGGAGGGTAACAAATTTACCGCTGTTCTTTTCTGCTGGATTTCTTTGAAAATCATTGCCTTGAGGGTTAACAATTTGAGCTGAAATA AGAAATTTATACTATTTAAGTTCATTTCCCAAATTTTAAATGTTGGATCTGTATTTGAAGTTCTATAGAAGTATTTACGTTTTAATGTCTGAATCTCGCT CCATGTAAGGTCAAAGGCAAAAATTCCACTTTTTGCTTGAAGTTCTGGGACAGTGGAAGATCGAGACATGAACTTAGTCATTGCGGTTGTAGTTCCTATT AAGTCTACCGAATTTGAACAGAAGGCAATTCCGTCTTTAGTCATTTGAACAGAGCAATCGATAATGTCTGCACCATCAACTATTGCTTGGTTATATGCAA GATCAGTGCTGCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_178417; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402487
| Blastp | Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 62.58% of identity |
|---|---|
| Blastx | Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 55.04% of identity |
| Eggnog | glycerophosphoryl diester phosphodiesterase(COG0584) |
| Kegg | Link to kegg annotations (AT5G58050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441286.1) |
| Pfam | Glycerophosphoryl diester phosphodiesterase family (PF03009.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |