Ll_transcript_402488

• Id Trinity: TRINITY_DN50592_c0_g1_i2
• Name Transcript: Ll_transcript_402488
• Sequence: GTTGAGAAAGTATGACCCCTTATTTATATATTGGAGGGGCACAAAGTGAGAGGGTAGAGTTAGGGTGATTGTGAAACCACACTCCGTTTCAGAAAGAGAA GCTGTTGATGCTCCACAATTAACCCTAATCTCTCTCTCTCTTCAATTTTGATTCATATCAAAATATTATTCTCACGCTCTGACTTTCACACACCCTTCTT ATGCTTCTTCATTCACTTCCCTCTCTCTCTCTCTCTAACATGAATGAGGCTGTGACGATGCTTTCGGAGTGTGGGAACTATGGGTTGTCGCCGTTAAGCA ATCGTCGCCGGTGGCATCTATGCTATCCATGGTGGTGTTGTTGCTTCTCGACGGCTTATCCTTTTTTAGTGCCAAAAAATCTGAGCCTCACTCAAAAAAC TATTTCTATGCCGTGTTTTTCTTAGTGCCATGTTTGGAGTGAGAGATCGGAAAACGTTTTTCCGATACTACATTCTCCCTCTCTTATTCCATACATAATC GATTCAACATAGTGGGTTAGTTCTGTTTTCTGCAACTTTTTTTATTTATTTATTAAAATAACTATTGTGTTTACTTAAAACTAACTTAAGTTTCAGATTG TAGTATCAGATTCTCATCAAAATCATTCTCATAATAAAATTTGGGAGTGACATTTGTATTAGACTATTAGTAGTATTTCACAATACAAATCCGCTCTTTT ATCAACTTTTTTGTATTTCAATGACTTAGTTCTGTTTAGAGATTGTGATAACGGATTTTGATATAGTCTTCCACATTACTACATTATATAAATTATCAAG ACAGAACTGAATTTTGAAATAAATGGTTTCTGTGATAATTCAATGTTGAACCGTGAATAAGGGAAACACAAGCAGAGATGGGGGCTCAAATGAGTAGTGT TAAATAGATAGATGTTATTCATTTGTTTAGAAAAAATACTCACTCATATCTCTTACTAAGATGGAAAAGTGAAGATTTGAGTATCTCACTTTTGTATTTC ATAGTTCTGAAGCCTTTTCTTTCGTTATTCTCCGAAAATACACCTTGCAAATGGACCATAAGGGTATGCTTGGTATATCTTTAGAGGGAAAAGGAAGACT TCGAAGTCTTACAAATGTATTTCTTGATTCATAAGTCTTTTTCGACCTCACAAATAGACTTTTAAGAGTTTATTTGGGAGTTAGATTTTGGAGAGGAAAG AAGAGAAATAGAATACTTGAGAGCCATGAAATACATGTGTGATATGACTCCCAAGCCTTCCTTTTTCTTTCATCCCCTCCAAAATCCAAATCCCAAACAA CCTCACAAATAAGCCCTGCCTGGTCAATTTTTTTCCTAATAACACTTTGGAGATAATTAATCATACATTTTTTATTCATTAATATTCTTATTGGGTGAGA ATGATATAAACATAAATTTACTCTAAGTCTCGTGTGAAGATATCAAATGAATCTTATTGCAACATTATTTCCTTCTGGGATCATAGGCAATGCCAATATG AACAGAGTTGATGATACATGTAGTGATACAAAAAGTAGGACAATAGATGTTCTCTCGAATGAATGGCTGTCATGGTCTTATGTTACAAACTGAAGTATCA CATGAGATGGTGGATAAAAATTGAAGATATAGAAGGTCCATGCCAAGTTTGAATAAAATTAATGACTAGTAGAAAGCATAGCAAAAACCAATACTGCTAC AAGGGACAGAGCAATATTGGAAACACTTTCTGGGGCAGTTGAAGAGGGTGGAACTGCAGCAGCTGAAGCAGCAGGCACATCTTTAGTCACCTTAACCACT GCCGGAAGAGGTGGATCAACAACATTTGCAACCTCGAGAGGTGGAAGTGGTGAACCTTCTGGTGGTAATATTTCAACTGGAATAGTACTCAATAGTTCAC CAGGTTGAGCTGGTAAGATGGTATGCACATGTTTGGGATCACTACATGGACTTCCTGCAAATTATAGACAGTGGCAGGAAAATCGGTCACGAATCCATCA ACTCTAGCAGTTTGGACATAAGTAGCAATCTCAATATTAGGATCTGACCAATAGTCAAAGGCCAAGGATGTGTATTCATTTCTGAGAGAATGGACGAATA CTGTGAGATTTGCATCATGCAACTCTTTAGCAACATTTGTCATCCCTGATAACACGGAAGCAGAAGTCACTTTAATAAGAGAGGTTTTGGGAAGATTCAC TGCATTTGCATGCTTCTTAATTTCATCAACAGCCGGTCTTGGTGCATCGCCTATTATCTCACCGATATACAACACCCTTTTATATGCTGGGATATTCTTA AACTTAGAAAGCACTGAAGTATCATCTGATTGGATCAGGACTTGTTGTGTGGATTGCTTATCAAAGGTTGCATTGCTTAGGGCAGTGCTGACAGCACCTA CAATGTCAAGACCCTTCTTTGATGCAAGGTAGGCAGCATTCTGTGAGACAAATAAACACATTTAGAAGTAGTAGCAAATTTTCAAATAGAAGCACTATAG GGAGTTGAGGATGCTACTCACCGATATGTTGACCAAAGTGCCAGTAACTGCCTTAGCTTTGGCTAATTCCAAAAATTCCGGGAGGGTAACAAATTTACCG CTGTTCTTTTCTGCTGGATTTCTTTGAAAATCATTGCCTTGAGGGTTAACAATTTGAGCTGAAATAAGAAATTTATACTATTTAAGTTCATTTCCCAAAT TTTAAATGTTGGATCTGTATTTGAAGTTCTATAGAAGTATTTACGTTTTAATGTCTGAATCTCGCTCCATGTAAGGTCAAAGGCAAAAATTCCACTTTTT GCTTGAAGTTCTGGGACAGTGGAAGATCGAGACATGAACTTAGTCATTGCGGTTGTAGTTCCTATTAAGTCTACCGAATTTGAACAGAAGGCAATTCCGT CTTTAGTCATTTGAACAGAGCAATCGATAATGTCTGCACCATCAACTATTGCTTGGTTATATGCAAGATCAGTGCTGCCAGGATAAACACCACTTGCTCC ATCCCTGCTTATGATCAAAGTTGGTCCTGCAGAAGCAAATGTATTTACAAGTTTTAGAATTGTCATTGATATGTTTTCATATCTAAGCATTTGATTGAGA ACATTTCAATATTGGAAATTATACCTTTTTGGGGCAAGGTATTGTTGTGTGCAAAACAAGCTATAAAACAACAAAACTGTGAGAAAAAGGTTGAAGAGTA GGTTTGTAATTTGGAAGTTCTTGATGAATTAAAGGTTCAAGATTTGTCATCTCACCTATGGCATTTGATGCTGTTGATGGAAAATCAGTAACAACACCAT CAACAGAAACCTCCTTGTCTAGAAATTGCAAATACTCAGCTGTAGGATCATAGCTATAATTGTAACTTGAAAATAAATCATTAGCGAAACCAGAAACATA TACTTCTAGTCCAAGTTTATGAGCATCAACTACAAGGGTTGTAGGAAGTCCTAGATATTTGTCTGGTTTAACTGGCCATATGTATTGTTTTGGGACCATT ATGCCTGATGAAAACGACTTGATATTCAAAAGATCCTTCACAATCTCACCATATGGCTTTATGGTTGTGGGTTCAACATCTGTAGCATGAAGAAGCTGAA AGATGACCTTAGTTGCCTTGTTTGATTTTCCATTGATGCTCTTCAAGAAACCGATCTCTGGAGATGAAACAAAGTCTATCGGATAAACTTTTAATATTTC TAGAACAATATCTACCACCTTTAATCCATGTTGAGTATAAAATGCTTCATTCTGCAACAAAACACTCAATTAACGAAACTAAAAGGAACGAATGAGACAG TACTCAAGGAATTTCAATTTTCCTAGCATATCTCGATATTCATATAAGAGAGAGAAATAACCTGAACATTCAACCAGAACTTTGGTGGGGCTTTATCCTC TAGTAAATCATCAACATTAAGAACCGGGGAAACTCCATCGAAAAATTCGGGTCTAGAAAATATAGCCTGGTTTACTGTGGAAGATAAAACAGAGCAAAAT TTGGTTCATTTGATAAAACTGTTTTTTGTAAAAGATGCATGAATAAGAGTCTATATACATGCGCTAACAGTCCTAAGGAGGCTTTTGGTTGTAGAATGCT CTTTTGAGCACATTCCTAGATATTGATGTATAAG
• Tissue: pods
• Gene name: LI_gene_178417;
• Additional information: -

Expression of Ll_transcript_402488

FPKM

• PAB: 0.4
• PNAB: 0.1
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_402488

• Blastp: Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 62.03% of identity
• Blastx: Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 54.51% of identity
• Eggnog: glycerophosphoryl diester phosphodiesterase(COG0584)
• Kegg: Link to kegg annotations (AT5G58050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464595.1)
• Pfam: Glycerophosphoryl diester phosphodiesterase family (PF03009.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;