Id Trinity | TRINITY_DN50592_c0_g1_i5 |
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Name Transcript | Ll_transcript_402495 |
Sequence | GTTGAGAAAGTATGACCCCTTATTTATATATTGGAGGGGCACAAAGTGAGAGGGTAGAGTTAGGGTGATTGTGAAACCACACTCCGTTTCAGAAAGAGAA GCTGTTGATGCTCCACAATTAACCCTAATCTCTCTCTCTCTTCAATTTTGATTCATATCAAAATATTATTCTCACGCTCTGACTTTCACACACCCTTCTT ATGCTTCTTCATTCACTTCCCTCTCTCTCTCTCTCTAACATGAATGAGGCTGTGACGATGCTTTCGGAGTGTGGGAACTATGGGTTGTCGCCGTTAAGCA ATCGTCGCCGGTGGCATCTATGCTATCCATGGTGGTGTTGTTGCTTCTCGACGGCTTATCCTTTTTTAGTGCCAAAAAATCTGAGCCTCACTCAAAAAAC TATTTCTATGCCGTGTTTTTCTTAGTGCCATGTTTGGAGTGAGAGATCGGAAAACGTTTTTCCGATACTACATTCTCCCTCTCTTATTCCATACATAATC GATTCAACATAGTGGGTTAGTTCTGTTTTCTGCAACTTTTTTTATTTATTTATTAAAATAACTATTGTGTTTACTTAAAACTAACTTAAGTTTCAGATTG TAGTATCAGATTCTCATCAAAATCATTCTCATAATAAAATTTGGGAGTGACATTTGTATTAGACTATTAGTAGTATTTCACAATACAAATCCGCTCTTTT ATCAACTTTTTTGTATTTCAATGACTTAGTTCTGTTTAGAGATTGTGATAACGGATTTTGATATAGTCTTCCACATTACTACATTATATAAATTATCAAG ACAGAACTGAATTTTGAAATAAATGGTTTCTGTGATAATTCAATGTTGAACCGTGAATAAGGGAAACACAAGCAGAGATGGGGGCTCAAATGAGTAGTGT TAAATAGATAGATGTTATTCATTTGTTTAGAAAAAATACTCACTCATATCTCTTACTAAGATGGAAAAGTGAAGATTTGAGTATCTCACTTTTGTATTTC ATAGTTCTGAAGCCTTTTCTTTCGTTATTCTCCGAAAATACACCTTGCAAATGGACCATAAGGGTATGCTTGGTATATCTTTAGAGGGAAAAGGAAGACT TCGAAGTCTTACAAATGTATTTCTTGATTCATAAGTCTTTTTCGACCTCACAAATAGACTTTTAAGAGTTTATTTGGGAGTTAGATTTTGGAGAGGAAAG AAGAGAAATAGAATACTTGAGAGCCATGAAATACATGTGTGATATGACTCCCAAGCCTTCCTTTTTCTTTCATCCCCTCCAAAATCCAAATCCCAAACAA CCTCACAAATAAGCCCTGCCTGGTCAATTTTTTTCCTAATAACACTTTGGAGATAATTAATCATACATTTTTTATTCATTAATATTCTTATTGGGTGAGA ATGATATAAACATAAATTTACTCTAAGTCTCGTGTGAAGATATCAAATGAATCTTATTGCAACATTATTTCCTTCTGGGATCATAGGCAATGCCAATATG AACAGAGTTGATGATACATGTAGTGATACAAAAAGTAGGACAATAGATGTTCTCTCGAATGAATGGCTGTCATGGTCTTATGTTACAAACTGAAGTATCA CATGAGATGGTGGATAAAAATTGAAGATATAGAAGGTCCATGCCAAGTTTGAATAAAATTAATGACTAGTAGAAAGCATAGCAAAAACCAATACTGCTAC AAGGGACAGAGCAATATTGGAAACACTTTCTGGGGCAGTTGAAGAGGGTGGAACTGCAGCAGCTGAAGCAGCAGGCACATCTTTAGTCACCTTAACCACT GCCGGAAGAGGTGGATCAACAACATTTGCAACCTCGAGAGGTGGAAGTGGTGAACCTTCTGGTGGTAATATTTCAACTGGAATAGTACTCAATAGTTCAC CAGGTTGAGCTGGTAAGATGGATAATCTAAGAAAGCTGAAGAGATCAGAATTACTTACTGAGATATCTACTTGCAGTGGCAGGAAAATCGGTCACGAATC CATCAACTCTAGCAGTTTGGACATAAGTAGCAATCTCAATATTAGGATCTGACCAATAGTCAAAGGCCAAGGATGTGTATTCATTTCTGAGAGAATGGAC GAATACTGTGAGATTTGCATCATGCAACTCTTTAGCAACATTTGTCATCCCTGATAACACGGAAGCAGAAGTCACTTTAATAAGAGAGGTTTTGGGAAGA TTCACTGCATTTGCATGCTTCTTAATTTCATCAACAGCCGGTCTTGGTGCATCGCCTATTATCTCACCGATATACAACACCCTTTTATATGCTGGGATAT TCTTAAACTTAGAAAGCACTGAAGTATCATCTGATTGGATCAGGACTTGTTGTGTGGATTGCTTATCAAAGGTTGCATTGCTTAGGGCAGTGCTGACAGC ACCTACAATGTCAAGACCCTTCTTTGATGCAAGGTAGGCAGCATTCTGTGAGACAAATAAACACATTTAGAAGTAGTAGCAAATTTTCAAATAGAAGCAC TATAGGGAGTTGAGGATGCTACTCACCGATATGTTGACCAAAGTGCCAGTAACTGCCTTAGCTTTGGCTAATTCCAAAAATTCCGGGAGGGTAACAAATT TACCGCTGTTCTTTTCTGCTGGATTTCTTTGAAAATCATTGCCTTGAGGGTTAACAATTTGAGCTGAAATAAGAAATTTATACTATTTAAGTTCATTTCC CAAATTTTAAATGTTGGATCTGTATTTGAAGTTCTATAGAAGTATTTACGTTTTAATGTCTGAATCTCGCTCCATGTAAGGTCAAAGGCAAAAATTCCAC TTTTTGCTTGAAGTTCTGGGACAGTGGAAGATCGAGACATGAACTTAGTCATTGCGGTTGTAGTTCCTATTAAGTCTACCGAATTTGAACAGAAGGCAAT TCCGTCTTTAGTCATTTGAACAGAGCAATCGATAATGTCTGCACCATCAACTATTGCTTGGTTATATGCAAGATCAGTGCTGCCAGGATAAACACCACTT GCTCCATCCCTGCTTATGATCAAAGTTGGTCCTGCAGAAGCAAATGTATTTACAAGTTTTAGAATTGTCATTGATATGTTTTCATATCTAAGCATTTGAT TGAGAACATTTCAATATTGGAAATTATACCTTTTTGGGGCAAGGTATTGTTGTGTGCAAAACAAGCTATAAAACAACAAAACTGTGAGAAAAAGGTTGAA GAGTAGGTTTGTAATTTGGAAGTTCTTGATGAATTAAAGGTTCAAGATTTGTCATCTCACCTATGGCATTTGATGCTGTTGATGGAAAATCAGTAACAAC ACCATCAACAGAAACCTCCTTGTCTAGAAATTGCAAATACTCAGCTGTAGGATCATAGCTATAATTGTAACTTGAAAAGATATCGTTAGCAAAACCAGAA GCATATACTTCTAGTCCAAATTTATGAGCATCGGCTACGAGTGTTGTAGGAAGACCCAAATATTTGTCTGGTTTAACTGGCCATATGTATTCTTTTGGGA CCATTATGCCTGATGCAAATGACTTGATGTGCAAAAGATCCTTCACAATGTCACCATATGGCTGCCTGGTTGTAGGTTCAACATCAGTAGCTTGAAGAAG CTGAAAGATGACCT BLAST |
Tissue | pods |
Gene name | LI_gene_178417; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_402495
Blastp | Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 62.58% of identity |
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Blastx | Glycerophosphodiester phosphodiesterase GDPDL6 from Arabidopsis with 55.04% of identity |
Eggnog | glycerophosphoryl diester phosphodiesterase(COG0584) |
Kegg | Link to kegg annotations (AT5G58050) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464595.1) |
Pfam | Glycerophosphoryl diester phosphodiesterase family (PF03009.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |