Ll_transcript_403865

• Id Trinity: TRINITY_DN50593_c0_g3_i13
• Name Transcript: Ll_transcript_403865
• Sequence: ATCTTATTGAGTATTGTAAACTCTTCAGCACATCGGAAAAATATCATTGAGTGCAGCATTGGTGACGTCTTCTGTAAATGTCAAATGGTGTTATTAATGC GGCACTCAATCATATTTTTCTTTTGAATGTGGTACTGATATGTATGGTCATGGAGCATAGTGCTTGCACTTATTGATCTAATCAAAATCAATCGCAATTT GAAACAATTGAATTTATTTTTATGGTGAGAAAATCAACAGAGCAAGAAGAAGAGCCTCTACCGGACAACCTCCGTTGCAGCCGTACCGACGGCCGGCAAT GGCGGTGCCGGCGGAGAGTGTTGGAAGGTCTGAAGCTTTGTGAGACTCACTACCTTCAAGGTCGTCATCGCCAGAACAAGGAGAAGGTACCTGATTCACT CAAGCTTCAGAGAAAAAGCACCACCAACCAAAACGGCGTCGTTTCGGAGAACGATGAAATTAGGGCAAAGTTGGTGAAGAAGAAGAAGAGGAAGCAGAAT TCGGATGATGCAATTGGTTCTTCGGGGAAGAAAAGGAAAAACAGTGATATACGGGTTGAATTGTTAACGATGGTTCTGGAGAGAGAGATTCAGAAAACGA AGAAGAAGAAGAAGAAGAAAACAAAGACAAAGAGAAAGAAAAATCAGAGGGAGAAAAAGAGGAATGTTACGGAAGAGGATGAAGAAGATGATGAATTGTG TTATAGTGAGGGAGAGTTGAGAAAAGAATTGCCAAATGGTATTATGGAAATTGCTCCTGCTTCTTCAATGCACAATGTGGGTTCTCATTCGGATGTTAAA GTTTCCGACTTCGATCGTAATCGATCACTTGCACTTACGCCTCGTCTCTTCAGGTCCAAGAATGTTGATCGGAGCATCAATGTTGTTTCATATGGAAGGA ACTTGAAGAAGGGTAAGAGGAAGAAGTGTCATTGGTGCAAGAGCATTGATTCATGGAATCTTATAATGTGTTCTGGCTGCCAGAAGGAGTTCTTCTGCTT GGATTGCATTAAAGAACGGTATTTTGAAACTCAAAATGAAGTTAAGATGGCATGTCCAGTTTGCCGGGGAACTTGCACTTGCAAAGATTGTTTGGCAAGT CAATGCAGAGACAGTGAAAGTAAGGAATATTTGGATGGTAGAAGCAGAGTTGATCAAATATTGCATTTCCATTATTTGATATGCATGCTTCTCCCTGTAC TAAAACAAATAAGTGAAGACCAGCATACTGAGCTAGAAACAGAAGCAAAAATTAAAGGGAAAAGAGTTTCTGATATTCTCATCAAGCAGGTCGAATTTGG CTGCAATGAGGAAAATTACTGCAATCACTGCAAAACACCCATTTTGGATCTTCATAGAAGCTGCCGTAGTTGTTCCTATAGCCTTTGCTTAAGTTGTTGC CACAAATTAAGCCAAGGAAGCACCTCTGAAGAAATTACCTCTTCGATGTCCAAGCTGCCTGACAAAATGAACAATTGCATTGCCAGTGAAAGCCACCTTT CAGATGATAAAACCAGTTCTAGTAGCAATTTAACTGTTACTTCGATATTGCCTGAGTGGACCGCTTGTAACGGCACAGACAGTGTATCATGCCCTCCTAC AGAGCTAGGTGGTTGTGGTGATAGCCACCTTGATTTGAGATGTGTTTTTCCATTAAGTTGGATCAATGAGATGGAAGCAAAGGCAGAAGAAATAGCTTGC AGCTATGACTTTCCTGAAACTTTGGATAAAAATTCAAGCTGCTCAATGTGTAATGACAAAGATCATGAAACTAATGGATATTTCCAGTTGCAAGAAGCGG CTCAAAGAGAAGATTTGAATGATAATTGCTTGTTTTATCCCACAGTTTTGGACATCAGAAGTGATCATTTAGAACACTTCCAGAAACACTGGGGAAAAGG CCATCCTGTAGTAGTGCGAGATGTACTCCATATTACATCGAACATCAGTTGGGACCCACTGCTAATGTTCTGCGCTTATCTTGAGAGGTGCATTACAAGA TACGAGAATAATAAGGACCAACTTCAAGCTTGTTTGGATTGGTGTGAGGTGGAAATTAACATTGGGCAGTATTTTAGTGGATCTCTTCAATATCGGTCTC AGAAAAACACTTCGCATGAGATGCTAAAACTAAAGGGGTGGTTGTCTTCCCAGATGTTCAAAGAACAGTTTCCAGCTCACTTTGCTGAAGTAATTAATGC TCTACCAGTTCGAGAATACATGAACCCCATGTCTGGTCTTCTGAATGTAGCTGCAAATTTGCCACAAGGGAGTTCAAAACATGACATAGGACCATATATC TATTTTTCATATGACTGTGCTGACGAAGAAGATGTTTCTGTGACTAAGCTCTGTTATGACTCATATGATGTGGTTAATATCATGGCACATACCACAGATG TCCCCCTTACTACTGAACTCCTTACAAAAGTAAGGAAGCTACTGAAAAAGCAGAAAGCCCTGTGTCAAAGGGAGTCTTCTAAAATTTCTACCGAGCAGCT ACAGGAGCAGAAAGTAAATGGAATCCCATTATTGGATGCTCAAGACATGGAGCAAAAAGAATGGCAGAGTATGACCACAGAAAGAAAGGACTTTTTCAGG AGAGTCAATAGAACATCTTGTATCTCAACTGAAACACAAAAATTAGGGAGTAGAAGTATAGACAACAATGCTGACCTGGATGGAGAATGTGATATATTTT CTGATTCTGATTCTGATTCTGAGTCCACTTTACCTCTCCATGGGTGTGTTCAAAGCACTGAATTGTTTACAAGAAATAATTCTATAAATCCTTCCCGAAG TTCAAACAGCAAGAGAAGTAAGTTCACTGAGCTTTCTGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTGCCAAAGCTCATAGAATACCTTAAAAAA CACTGTGATGAACCTTCTTATACCGGTGACTATCATCACAAGAAAATGGTTCATCCTATTCTGGATCAGAGCCTTTTTCTTGACAGCACTCACAAAAAAA GGCTTAAGGAGGAGTTTAAGATTGAACCCTGGACTTTTCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATAAGGAATTC TAAGGTTTTCTGAACTTGCATAAAGATTATCTTTCTCTTTTTTTGTGTGTGTATGTTTAATTTGAAAAGCAGAAAGCTTTTGAATTTAAATTGTTCTTGA ATCGGGTATCCATTCTTGTTGAACTTGATGTTTTAAATCTTTGAAATTACTACTAATTATAATTGTTTAAGTTTTACATTTGAGCATTTGATTTAATCGA CACTTGCATCAGTGTATGGAGAATTTAGAAGTGAAACTAAAGTATGATTACACTAACTAAATCAACGGCCTTAAATTTTCTTGTGATCGCTGGTGAAGAA CATCATTATCTTAATATCGGCCTATGTACCACTTTAACATATTCTAAATGGTGAATGTATGACAAGTATTTTGTTTCATTGTCTGCAGTGCTGTGTACAT GTTGTATTGGAATTTATGTCACCGGAAAATGTTAGCGAGTGTATCAAGTTAATGGACGAGGTTCGCCTGCTGCCTGATAACCATAAAGCAAAAGTGGACA AGTTGGAGGTGAAGAAACTGGCCCTTCATAGCATGAGTGCAGCAATTAAAGAAGTACATGAACTTACATGCAAAACATAATTGCTTGTACATGCTAAAGT ATATTTACAAGTCTCAGGCTTTGAAGCTATTGTGTTCCATTTTTGTACAGAGTATTCTCAAACTAAGATCTATCAAAGTACTTATTATTGAATTGATTAA TCTCAGTTACTATCATTTTTGGTATGTTTTGACGTTTTATGCCTCACCTGAATTTGAAATAAAAGTATGGTCCATACTCCATATATTTTATGCCTCAATG AGGAAAAAGACTTCTTAGTTCACACCATTATCTATCAATTGCAATTCCTCTTTGGTAAAGCTACGGGGC
• Tissue: pods
• Gene name: LI_gene_178423;
• Additional information: details;

Expression of Ll_transcript_403865

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403865

• Blastp: Lysine-specific demethylase JMJ25 from Arabidopsis with 38.15% of identity
• Blastx: Lysine-specific demethylase JMJ25 from Arabidopsis with 38.15% of identity
• Eggnog: lysine (K)-specific demethylase(ENOG410XTAA)
• Kegg: Link to kegg annotations (AT3G07610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425779.1)
• Pfam: WRC (PF08879.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;