Id Trinity | TRINITY_DN50593_c0_g3_i2 |
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Name Transcript | Ll_transcript_403847 |
Sequence | TATGATAACATCACGAGATTTTGAATACTCCCTTATCTTCCTTTGATAAAAATGATCCCACATATTCCAATGTTAAATATTACGAGACCAAATAGGACTT TTGACTTGTTCATAATTACGGGAATATGCCATTCTCATTGTTTTTTCTTCCTAATAAATACAACACAGACTTTGGGCCTGAAAACAGAAAAAACCCTTTC TATTACTCTGCAGAAAATACGTATTTTTTCTGTGCCTAGGTTTCACTTTTCCCATCAAAATTTCCCAATTCTCTCATCAGAGAAAATTTTGAATTGTAAT GGGAAAAAAACCAGCGACGACGGAGGAGGAAGAGGCATTGCCGGACCACCTGCGATGCGGGCGAACAGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTG AAGGAGAATTTGAAGCTATGCGAGATTCACTACCTTCAAGGTCGTCATCGCCAGTTCAAGGAGAAAGTTCCAGAATCACTGAAGCTTCAAAGGAAGCGCA AGAAGAATAAGAAGGACCCTGTTGTCAATTTGAGCAGCAATGCAGAAATTAGGGCACAGAGAATGAAGAAAAAGCGCAAGATTTCAGAGGCATTGGGTTC TAAGAAGAAGGGGTTTAAGTTGAAGAATGGTGATAGCAATATGCAGTTGGAGCTTATAAGGATGGTTTTGCAAAGAGAAGTTGAGAAAAGGAAGAAGACA AAGAAGATGAAGAAGGAAAAGGAGGAAGAGGATTATGATGACGAAGAAACGGAATCGGATTACAATGAAGAAGAGTTGAAGAGAGAATTGCCTAATGGTG TAATGGCAATATCTCAAGCTTCAACACCTCATCATTATAGCAATGTGGGTCCCGGATCACAATCCCATTGTGATGTGAAAGTTGGTGTTGATTATAGAGC AGTTACACCACGTTACTTCAGGTCCAAGAATGTTGATAGAATCTCTGGTGGCAAGTTGCAGGTTGTGCCATATGGACCAAACTTGAAAGGTAAGGGTCGG AGGAAGAAGTGTCATTGGTGCCAGAGAAGTGATTCTTGGAAACTTATAAAGTGTTCGAGCTGTCAGAATAAGTTTTTCTGCATGGATTGCATTAAAGAAG GGTCTTTTGACACTCCGTATGAAGTTAAGAAGGCGTGTCCAGTTTGTCGAGGGACTTGCGTCTGTAAGGACTGCTTGTCAAATCAACGTAAAGACAGTGA AAGTAAGGAATACTTAGCTGGTAAAAGCAGAGTTGATAGAATATTACATTGTCACTATTTGATCTGTATGCTCCTTCCGGTACTAAACCAAATAAGTGAT GAACAGAAAGCTGTGCTAGAAACAGAAGCAAAAATCAATGGGAAAGAACTTTCCGATACTCAGATGAAGCAGGTTGACTTTGGCTACACTGAGAAAATTT GTTGCAATCACTGCAAAAGACCTGTTTTGGATCTCCATAGAAGCTGTCTTAGTTGTTCATATAGCCTTTGCTTAACTTGCTGTCAGAAATTAAATCCAGG AAGGACTTCTGGAGGAACTAACTCATCTATGTTTAAGCTACCTGATAAGTTGAAAGCTTGCATTTCCATGGATGAGAAGTCCATTTCCAGTGGCAATTTA ACTGGTACTTCAGTATTGCCTGAGTGGACAAATTGTAATGGTATTGATAATATATCATGCCCGCCTACAGAGCTTGGTGGTTGTGGTAACAGCCACCTTG ATTTGAGATGTACCTTTCCCTTAAGTTGGATCAAAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAG TTCAAGCTGCTCACTCTGTTTTGACACAGATCACAAAAGTAACAGATTTAAGTTGTTGCAAGAAGCAGCTTTCAGAGAAGATTCAAATGATAATTGCTTG TTTTATCCCACAGTTTTGGATATCAATGGGAATAACTTTGAACATTTTCAGAAGCACTGGGGAAAAGGCCATCCTATGGTAGTGCGAGATGTGCTCCAAA GTTCATCGAACCTTAATTGGGATCCACTGATCATGTTCTGTAATTATCTTGAGAGGAGCATTGCAAGATATGAGAATAATAAGGAACTGCTTGAATCTTG TTTGGATTGGTGTGAGGTGGAGATTAACATTAGGCAGTATTTTGCTGGGTCTCTCAAACGCCGTCCACAGAAAAACACTTGCCATGAGATGCTGAAACTA AAGGGGTGGCTTTCTTCCCAGCTATTCAAAGACCAGTTCCCAACTCACTTTGCTGAAGTAATTGATGCTCTACCAGTTCAAGAATACATGAATCCGATGT CTGGTCTTTTAAATTTAGCTGCAAAGTTGCCACAAGGGAGTTCAAATCATGAGAATGGGCCATATGTGTATATTTCATATGGCTGTGCTGATAAAGAAGC TAGTTCTGTGACAAAACTCTGCTATGACTCATATGATGTGGTTAATATCATGGCACATACCACAGATGTCCCCCTTACTACTGAACTCCTTACAAAAGTA AGGAAGCTACTGAAAAAGCAGAAAGCCCTGTGTCAAAGGGAGTCTTCTAAAATTTCTACCGAGCAGCTACAGGAGCAGAAAGTAAATGGAATCCCATTAT TGGATGCTCAAGACATGGAGCAAAAAGAATGGCAGAGTATGACCACAGAAAGAAAGGACTTTTTCAGGAGAGTCAATAGAACATCTTGTATCTCAACTGA AACACAAAAATTAGGGAGTAGAAGTATAGACAACAATGCTGACCTGGATGGAGAATGTGATATATTTTCTGATTCTGATTCTGATTCTGAGTCCACTTTA CCTCTCCATGGGTGTGTTCAAAGCACTGAATTGTTTACAAGAAATAATTCTATAAATCCTTCCCGAAGTTCAAACAGCAAGAGAAGTAAGTTCACTGAGC TTTCTGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTGCCAAAGCTCATAGAATACCTTAAAAAACACTGTGATGAACCTTCTTATACCGGTGACTA TCATCACAAGAAAATGGTTCATCCTATTCTGGATCAGAGCCTTTTTCTTGACAGCACTCACAAAAAAAGGCTTAAGGAGGAGTTTAAGATTGAACCCTGG ACTTTTCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATAAGGAATTCTAAGGTTTTCTGAACTTGCATAAAGATTATCT TTCTCTTTTTTTGTGTGTGTATGTTTAATTTGAAAAGCAGAAAGCTTTTGAATTTAAATTGTTCTTGAATCGGGTATCCATTCTTGTTGAACTTGATGTT TTAAATCTTTGAAATTACTACTAATTATAATTGTTTAAGTTTTACATTTGAGCATTTGATTTAATCGACACTTGCATCAGTGTATGGAGAATTTAGAAGT GAAACTAAAGTATGATTACACTAACTAAATCAACGGCCTTAAATTTTCTTGTGATCGCTGGTGAAGAACATCATTATCTTAATATCGGCCTATGTACCAC TTTAACATATTCTAAATGGTGAATGTATGACAAGTATTTTGTTTCATTGTCTGCAGTGCTGTGTACATGTTGTATTGGAATTTATGTCACCGGAAAATGT TAGCGAGTGTATCAAGTTAATGGACGAGGTTCGCCTGCTGCCTGATAACCATAAAGCAAAAGTGGACAAGTTGGAGGTGAAGAAACTGGCCCTTCATAGC ATGAGTGCAGCAATTAAAGAAGTACATGAACTTACATGCAAAACATAATTGCTTGTACATGCTAAAGTATATTTACAAGTCTCAGGCTTTGAAGCTATTG TGTTCCATTTTTGTACAGAGTATTCTCAAACTAAGATCTATCAAAGTACTTATTATTGAATTGATTAATCTCAGTTACTATCATTTTTGGTATGTTTTGA CGTTTTATGCCTCACCTGAATTTGAAATAAAAGTATGGTCCATACTCCATATATTTTATGCCTCAATGAGGAAAAAGACTTCTTAGTTCACACCATTATC TATCAATTGCAATTCCTCTTTGGTAAAGCTACGGGGC BLAST |
Tissue | pods |
Gene name | LI_gene_178423; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403847
Blastp | Lysine-specific demethylase JMJ25 from Arabidopsis with 36.26% of identity |
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Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 36.67% of identity |
Eggnog | lysine (K)-specific demethylase(ENOG410XTAA) |
Kegg | Link to kegg annotations (AT3G07610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445607.1) |
Pfam | WRC (PF08879.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |