| Id Trinity | TRINITY_DN50593_c0_g3_i22 |
|---|---|
| Name Transcript | Ll_transcript_403882 |
| Sequence | TATGATAACATCACGAGATTTTGAATACTCCCTTATCTTCCTTTGATAAAAATGATCCCACATATTCCAATGTTAAATATTACGAGACCAAATAGGACTT TTGACTTGTTCATAATTACGGGAATATGCCATTCTCATTGTTTTTTCTTCCTAATAAATACAACACAGACTTTGGGCCTGAAAACAGAAAAAACCCTTTC TATTACTCTGCAGAAAATACGTATTTTTTCTGTGCCTAGGTTTCACTTTTCCCATCAAAATTTCCCAATTCTCTCATCAGAGAAAATTTTGAATTGTAAT GGGAAAAAAACCAGCGACGACGGAGGAGGAAGAGGCATTGCCGGACCACCTGCGATGCGGGCGAACAGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTG AAGGAGAATTTGAAGCTATGCGAGATTCACTACCTTCAAGGTCGTCATCGCCAGTTCAAGGAGAAAGTTCCAGAATCACTGAAGCTTCAAAGGAAGCGCA AGAAGAATAAGAAGGACCCTGTTGTCAATTTGAGCAGCAATGCAGAAATTAGGGCACAGAGAATGAAGAAAAAGCGCAAGATTTCAGAGGCATTGGGTTC TAAGAAGAAGGGGTTTAAGTTGAAGAATGGTGATAGCAATATGCAGTTGGAGCTTATAAGGATGGTTTTGCAAAGAGAAGTTGAGAAAAGGAAGAAGACA AAGAAGATGAAGAAGGAAAAGGAGGAAGAGGATTATGATGACGAAGAAACGGAATCGGATTACAATGAAGAAGAGTTGAAGAGAGAATTGCCTAATGGTG TAATGGCAATATCTCAAGCTTCAACACCTCATCATTATAGCAATGTGGGTCCCGGATCACAATCCCATTGTGATGTGAAAGTTGGTGTTGATTATAGAGC AGTTACACCACGTTACTTCAGGTCCAAGAATGTTGATAGAATCTCTGGTGGCAAGTTGCAGGTTGTGCCATATGGACCAAACTTGAAAGGTAAGGGTCGG AGGAAGAAGTGTCATTGGTGCCAGAGAAGTGATTCTTGGAAACTTATAAAGTGTTCGAGCTGTCAGAATAAGTTTTTCTGCATGGATTGCATTAAAGAAG GGTCTTTTGACACTCCGTATGAAGTTAAGAAGGCGTGTCCAGTTTGTCGAGGGACTTGCGTCTGTAAGGACTGCTTGTCAAATCAACGTAAAGACAGTGA AAGTAAGGAATACTTAGCTGGTAAAAGCAGAGTTGATAGAATATTACATTGTCACTATTTGATCTGTATGCTCCTTCCGGTACTAAACCAAATAAGTGAT GAACAGAAAGCTGTGCTAGAAACAGAAGCAAAAATCAATGGGAAAGAACTTTCCGATACTCAGATGAAGCAGGTTGACTTTGGCTACACTGAGAAAATTT GTTGCAATCACTGCAAAAGACCTGTTTTGGATCTCCATAGAAGCTGTCTTAGTTGTTCATATAGCCTTTGCTTAACTTGCTGTCAGAAATTAAATCCAGG AAGGACTTCTGGAGGAACTAACTCATCTATGTTTAAGCTACCTGATAAGTTGAAAGCTTGCATTTCCATGGATGAGAAGTCCATTTCCAGTGGCAATTTA ACTGGTACTTCAGTATTGCCTGAGTGGACAAATTGTAATGGTATTGATAATATATCATGCCCGCCTACAGAGCTTGGTGGTTGTGGTAACAGCCACCTTG ATTTGAGATGTACCTTTCCCTTAAGTTGGATCAAAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAG TTCAAGCTGCTCACTCTGTTTTGACACAGATCACAAAAGTAACAGATTTAAGTTGTTGCAAGAAGCAGCTTTCAGAGAAGATTCAAATGATAATTGCTTG TTTTATCCCACAGTTTTGGATATCAATGGGAATAACTTTGAACATTTTCAGAAGCACTGGGGAAAAGGCCATCCTATGGTAGTGCGAGATGTGCTCCAAA GTTCATCGAACCTTAATTGGGATCCACTGATCATGTTCTGTAATTATCTTGAGAGGAGCATTGCAAGATATGAGAATAATAAGGAACTGCTTGAATCTTG TTTGGATTGGTGTGAGTGGTACTTTGTGGCAGGTGGAGATTAACATTAGGCAGTATTTTGCTGGGTCTCTCAAACGCCGTCCACAGAAAAACACTTGCCA TGAGATGCTGAAACTAAAGGGGTGGCTTTCTTCCCAGCTATTCAAAGACCAGTTCCCAACTCACTTTGCTGAAGTAATTGATGCTCTACCAGTTCAAGAA TACATGAATCCGATGTCTGGTCTTTTAAATTTAGCTGCAAAGTTGCCACAAGGGAGTTCAAATCATGAGAATGGGCCATATGTGTATATTTCATATGGCT GTGCTGATAAAGAAGCTAGTTCTGTGACAAAACTCTGCTATGACTCATATGATGTGGTTAATATCATGGCACATACCACAGATGTCCCCCTTACTACTGA ACTCCTTACAAAAGTAAGGAAGCTACTGAAAAAGCAGAAAGCCCTGTGTCAAAGGGAGTCTTCTAAAATTTCTACCGAGCAGCTACAGGAGCAGAAAGTA AATGGAATCCCATTATTGGATGCTCAAGACATGGAGCAAAAAGAATGGCAGAGTATGACCACAGAAAGAAAGGACTTTTTCAGGAGAGTCAATAGAACAT CTTGTATCTCAACTGAAACACAAAAATTAGGGAGTAGAAGTATAGACAACAATGCTGACCTGGATGGAGAATGTGATATATTTTCTGATTCTGATTCTGA TTCTGAGTCCACTTTACCTCTCCATGGGTGTGTTCAAAGCACTGAATTGTTTACAAGAAATAATTCTATAAATCCTTCCCGAAGTTCAAACAGCAAGAGA AGTAAGTTCACTGAGCTTTCTGGTGCCCAGTGGGATGTCTTTCGCAGACAAGATGTGCCAAAGCTCATAGAATACCTTAAAAAACACTGTGATGAACCTT CTTATACCGGTGACTATCATCACAAGAAAATGGTTCATCCTATTCTGGATCAGAGCCTTTTTCTTGACAGCACTCACAAAAAAAGGCTTAAGGAGGAGTT TAAGATTGAACCCTGGACTTTTCAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATAAGGAATTCTAAGGTTTTCTGAACT TGCATAAAGATTATCTTTCTCTTTTTTTGTGTGTGTATGTTTAATTTGAAAAGCAGAAAGCTTTTGAATTTAAATTGTTCTTGAATCGGGTATCCATTCT TGTTGAACTTGATGTTTTAAATCTTTGAAATTACTACTAATTATAATTGTTTAAGTTTTACATTTGAGCATTTGATTTAATCGACACTTGCATCAGTGTA TGGAGAATTTAGAAGTGAAACTAAAGTATGATTACACTAACTAAATCAACGGCCTTAAATTTTCTTGTGATCGCTGGTGAAGAACATCATTATCTTAATA TCGGCCTATGTACCACTTTAACATATTCTAAATGGTGAATGTATGACAAGTATTTTGTTTCATTGTCTGCAGTGCTGTGTACATGTTGTATTGGAATTTA TGTCACCGGAAAATGTTAGCGAGTGTATCAAGTTAATGGACGAGGTTCGCCTGCTGCCTGATAACCATAAAGCAAAAGTGGACAAGTTGGAGGTGAAGAA ACTGGCCCTTCATAGCATGAGTGCAGCAATTAAAGAAGTACATGAACTTACATGCAAAACATAATTGCTTGTACATGCTAAAGTATATTTACAAGTCTCA GGCTTTGAAGCTATTGTGTTCCATTTTTGTACAGAGTATTCTCAAACTAAGATCTATCAAAGTACTTATTATTGAATTGATTAATCTCAGTTACTATCAT TTTTGGTATGTTTTGACGTTTTATGCCTCACCTGAATTTGAAATAAAAGTATGGTCCATACTCCATATATTTTATGCCTCAATGAGGAAAAAGACTTCTT AGTTCACACCATTATCTATCAATTGCAATTCCTCTTTGGTAAAGCTACGGGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_178423; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403882
| Blastp | Lysine-specific demethylase JMJ25 from Arabidopsis with 32.47% of identity |
|---|---|
| Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 48.04% of identity |
| Eggnog | lysine (K)-specific demethylase(ENOG410XTAA) |
| Kegg | Link to kegg annotations (AT3G07610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445607.1) |
| Pfam | WRC (PF08879.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |