| Id Trinity | TRINITY_DN50593_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_403852 |
| Sequence | TCTGTGCCTAGGTTTCACTTTTCCCATCAAAATTTCCCAATTCTCTCATCAGAGAAAATTTTGAATTGTAATGGGAAAAAAAACCAGCGACGACGGAGGA GGAAGAGGCATTGCCGGACCACCTGCGATGCGGGCGAACAGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTGAAGGAGAATTTGAAGCTATGCGAGATT CACTACCTTCAAGGTCGTCATCGCCAGTTCAAGGAGAAAGTTCCAGAATCACTGAAGCTTCAAAGGAAGCGCAAGAAGAATAAGAAGGACCCTGTTGTCA ATTTGAGCAGCAATGCAGAAATTAGGGCACAGAGAATGAAGAAAAAGCGCAAGATTTCAGAGGCATTGGGTTCTAAGAAGAAGGGGTTTAAGTTGAAGAA TGGTGATAGCAATATGCAGTTGGAGCTTATAAGGATGGTTTTGCAAAGAGAAGTTGAGAAAAGGAAGAAGACAAAGAAGATGAAGAAGGAAAAGGAGGAA GAGGATTATGATGACGAAGAAACGGAATCGGATTACAATGAAGAAGAGTTGAAGAGAGAATTGCCTAATGGTGTAATGGCAATATCTCAAGCTTCAACAC CTCATCATTATAGCAATGTGGGTCCCGGATCACAATCCCATTGTGATGTGAAAGTTGGTGTTGATTATAGAGCAGTTACACCACGTTACTTCAGGTCCAA GAATGTTGATAGAATCTCTGGTGGCAAGTTGCAGGTTGTGCCATATGGACCAAACTTGAAAGGTAAGGGTCGGAGGAAGAAGTGTCATTGGTGCCAGAGA AGTGATTCTTGGAAACTTATAAAGTGTTCGAGCTGTCAGAATAAGTTTTTCTGCATGGATTGCATTAAAGAAGGGTTTGTTATTTTTAAGTACATTTACC CCATGCTTTCCCTAAATTTTGAGCATGAGCATGAAACTGAATTCATGTAACATTATCTGTGTATTACTTATTTTGAAGTTTGTTGTGTGTTGAATTTCTT GTTTCATTGTTATTGTCTGGTGTTTAATTTATTGTTTTGAAGTTTGTTGTGTGTTGAATTTCTTGTTTCATTGCTATTTCAGATGAAAATAGATTTCATG CCTTCCAATTGGAATCAACATATTATTTTGACCTTCTGAAATAGCGATATCACTTACATCTTATTGATTAGTAGTGCTAAGATATTTACTGCTATGATTT CTGCACTCTGCTCCTTATAAATTGAGAATCAAAAGGTGAGACATTTGCCAATATTTTTTTGAACAAATTTAGGTCTTTTGACACTCCGTATGAAGTTAAG AAGGCGTGTCCAGTTTGTCGAGGGACTTGCGTCTGTAAGGACTGCTTGTCAAATCAACGTAAAGACAGTGAAAGTAAGGAATACTTAGCTGGTAAAAGCA GAGTTGATAGAATATTACATTGTCACTATTTGATCTGTATGCTCCTTCCGGTACTAAACCAAATAAGTGATGAACAGAAAGCTGTGCTAGAAACAGAAGC AAAAATCAATGGGAAAGAACTTTCCGATACTCAGATGAAGCAGGTTGACTTTGGCTACACTGAGAAAATTTGTTGCAATCACTGCAAAAGACCTGTTTTG GATCTCCATAGAAGCTGTCTTAGTTGTTCATATAGCCTTTGCTTAACTTGCTGTCAGAAATTAAATCCAGGAAGGACTTCTGGAGGAACTAACTCATCTA TGTTTAAGCTACCTGATAAGTTGAAAGCTTGCATTTCCATGGATGAGAAGTCCATTTCCAGTGGCAATTTAACTGGTACTTCAGTATTGCCTGAGTGGAC AAATTGTAATGGTATTGATAATATATCATGCCCGCCTACAGAGCTTGGTGGTTGTGGTAACAGCCACCTTGATTTGAGATGTACCTTTCCCTTAAGTTGG ATCAAAGAGATGGAAGTAAAAGCAGAAGAAATTGTTTGCAGCTATGACTTTCCTGAAACTTCAGATAAAAGTTCAAGCTGCTCACTCTGTTTTGACACAG ATCACAAAAGTAACAGATTTAAGTTGTTGCAAGAAGCAGCTTTCAGAGAAGATTCAAATGATAATTGCTTGTTTTATCCCACAGTTTTGGATATCAATGG GAATAACTTTGAACATTTTCAGAAGCACTGGGGAAAAGGCCATCCTATGGTAGTGCGAGATGTGCTCCAAAGTTCATCGAACCTTAATTGGGATCCACTG ATCATGTTCTGTAATTATCTTGAGAGGAGCATTGCAAGATGAGAATAATAAGGAACTGCTTGAATCTTGTTTGGATTGGTGTGAGGTGGAGATTAACATT AGGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178423; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403852
| Blastp | - |
|---|---|
| Blastx | Lysine-specific demethylase JMJ25 from Arabidopsis with 37.19% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445607.1) |
| Pfam | Domain of unknwon function (DUF3824) (PF12868.6) |
| Rfam | - |
| GO | - |