Ll_transcript_403137

• Id Trinity: TRINITY_DN50596_c0_g1_i29
• Name Transcript: Ll_transcript_403137
• Sequence: GTTCCATCAGATCTTTCAACGGATTCAGATGTGGTTAAGAGGTATCTGATTTAATTTGATCTGTTTTTTTCATGTTTATTAAAATGTATATGGTTTATGG TTTATTGTGGTTGAATTAGGGAGGTTGAGTCAATCTCAAAGAAATCGCTTCACAGCAATGTAGAGAAGTTTGAGTTCCAAGTTGAAGTGTCGCATCCTAT GGATATTATCCTAAATTATGGTTCTCCTTAAAGATGTATTTGGGAAATACAGTAACGCCTTGTGAGAAGCAATGATATGGTAGTACATTACATCATGTAT GTGCTTTCTGAAAATGTGGGTCTCTGTCATTTTATTTGCACATAGCATGCTAAAAAAAGTATCATATTAGATTCTTAGTGAAATGTTACTGTGTTGAGTA AAGAATGGAGGTGGGAATTTTTGTAGGTAAACAAATAGATCAAATTTTGATAAAAGACAAGGACCTGTATAAAAAAAATAATTTTGAGAATTCAACTCGG TACTTTTCTCATCAGTGGGAGGCATTCTGCAGTTATTATGAAAATATCTATTATATTGTCATTGTTTCCTTTCTTATACTCCTACAACAACAGTATCTCT CCCCTGGGCTGAATTTATGAAGTTTTATGTAGTTGTGTTTGATGCATTGGGAACATAACTTTGTATAACTAGCTTTAATAGGCTTTTGACATTTTGCTTT GGCTTACAGGAACATTTTCTGTGATCTATCTTCTGTCAAGTTTGAAGACTTGGCTTCATGGCTAATGATAGCCTTTGTACTCTCTCGTGAGGTTCCTGTT ACTTTTGAAAAGGTGTCTAAATTGCTTGCTGTAATGTATGTAGTTTCTGCCTCAAGTGAGCAATTTTCTCTGTCATCTTTTAGCAAAGTTTTGGGTGAAA ATTGTTGGGCTTCATATTTCCACCAAGCTTCCATTGGAACTCACCTTACTTACCGGTTTCTTTCAAATCTATCTGGGAGATACAAGGTACAACCCCCTCT TGATGATGAAGCATATCTTCATGCTTATAAATATAAGGAATTTTATCCATGGGTTCTATTATATATGTTAACCTTTGGAAAACAAAAACACCAATTGTTG GTTTGGCAGTTTGAAATTTCTCTTGTGAATTTGTGCTCTCATCATTATCCATATTTTTCAGAAAACTGCTACCTTTTCATTGCGTCTTTGATGCTTAATT AACGGTCCAGGCTAGATGGAACTAGAACTCTACTTAATGTTTTGGAAACCTGAGAAATTTCTCAGTGAAGCAAGAGTGTTTACTCAACCATGCTTCTACT CACGCTCAACTGTGGGTTTAAAAATGCTTTTATAATGAATGGTTGACATAATATCTGACATGAAAATGATGAATGTACAAATTTTATATTTCAAAATAGG ACTTCATACACGATGTCCACAATGTAAGGGGCCATAATTATCTAACCCAGCTGGTTTGTGGCAAGCAAACACAGTAAAATGAAACTGTTTTTGTAGTGGC TGAGGCTGATTGAACTGGTCTTTGGATATATCCCGTGTTTCCCTTTTTCAGAGTTGCTGATATGACACTCTAGTTGTATATAGAGTTAGGATCCTTTGAT AGCATTGTTATTCAAATTCAACCTAATACACGTAAATAATGTTTTACAGAATAAAGTTCTTGTGAAATCTGACTATTGGATAAAATAAAAGAAAATAAAA GAAGGCACAGAGCCAAGGTTCTAACTGTCGAAGATAAGCTAGTGGTGCTAGGATGCAGAGATCTAGAGAGGAGGATTGTGGAAGCAGAGATGGAATTGAC ACTAGCAAAGAGCCAAGGTTACCTCAAAGGTCAGCCACAACAGAATCCCAGGCTTCTTGCTGTTATCGGAGTCTATACTGGATTCGGAAGCCGATTGAAA CGAAATGTTTTCAGAGGCTCTTGGATGCCAACAGGCCTCTTTCCTTTTTCGT
• Tissue: pods
• Gene name: LI_gene_178438;
• Additional information: details;

Expression of Ll_transcript_403137

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.9
• PS2: 0
• PS3: 1.4
• PW1: 0
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_403137

• Blastp: Separase from Arabidopsis with 52.44% of identity
• Blastx: Hydroxyproline O-galactosyltransferase HPGT2 from Arabidopsis with 75.64% of identity
• Eggnog: extra spindle pole bodies homolog 1 (S. cerevisiae)(COG5155)
• Kegg: Link to kegg annotations (AT4G22970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458880.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;