Id Trinity | TRINITY_DN50596_c0_g1_i5 |
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Name Transcript | Ll_transcript_403106 |
Sequence | CACAATTTATCATAATCTCTATTTACATAATTTATCATAATATCTACCTATCCACAATCTTCGCTCTGTTATATGTTCATCTTCCAACAGGCTCCTGTTT CAAGTCATTCAACTTTTCTTGCTGGTTATCTATACTATGATTTGTGCCAAAGACTAGTTGCAAATGGACAGTTAATAGAGGCACTTTCATTTGCAAAGCA AGCTCATAGATTACATGCTGAACTCTTCCAACGGAAATTTACACGAAATGTTCAGCATCAGAATGAAAAGCACAATGTAATGATTGATTTCTCAAAAAAC CTTGGGGATGAGGTTGAGAAAATTGGAGTGAAAATATCAGCTATCCGGGATGTTTTTCTATTTGATTCTATATCATGGGACTTGAAAGACAGTTATCTTA GTCCATGGAAAATCTTGCAGTGTTATCTTGAGAGCACTCTTCAGGTAGGTATCATCCATGAAATGATTGGAGATGGAGGTGAGGCTGAAACTTATCTCCA ATGGGGGAAAGCCATATCCTGTTCACTACAGTTGCCTCTGTTTATGGTTACTTTCTCTTCCCTCTTAGGAAATCTGTATGTTAAGAAAAGACTATGGGAT TTAGCAGAAAAGGAACTTCAAAGTGCTGAGCAGATTTTAAAGGATGGCTTCACAACATTTTCTTGCTCAAAGTGTAAATTGATGCTTGAAGTGACTCTGT ATCAGTATCTTGGGGATTTGTGTCAACATAAATTTGAGACTTGTACAGGGGTTATTTCTGAAGTTACTGCAAAAAATTGGTACACATCAGCTCTGGACAA ACTAAATCTTTCTGAGTGGAAAAACCCTCTCACCTGTCCAGAAGAAGGCAATGATGAAACTGCACAAGATGTAACATGTGGTGGTAAGATTTGTGCTTGC CTAACAATAAATGAGGCAGGTGGAAATGTGACGGAATCCATGAAAGCAGGTCCAGAAACCAAGACTAGAGCAAAACAAAATAGAAAGACTAAGAATGCTG CAAAAGTTTTACGAAAGGAATCAAACTTGGGAGTTGAGGATAAACCAAGGATAACCCGTTCTAGATGCCGTTCTTCTCAGAATCAACATATTAGCATTTC CAGCAAGTCAGATGTTGGTGAAAGTCTGAAGGGGAACAATATATCTGATTCATCTGGCATGCTTCTTCAGAAGGATTCAGTGTTGAACAAGGAAGGTTGC ACTGTTGCTTCAAGGTATTCATTAAATTGCGATTCCAAAACAAGGTGTTGGCACTGTCTTCCGCCTGAAGTTATGAATTCTGGGTTACTAAACAACTTTA TCAATCTTAAATGGGAGTTTGTCCGTAGACAACTTTCAATGAATCTACTCACACGATTAGTGAAATGCTTTTCAATGGGAGGTCACATTCATGAAACATG TAAAATTCTTCTAAGAAGCATATCAGTTCTGGTCAGCAGAAATCCTTTCCATCAGACTTCTTCTGTTTCTGTAGATTATTTTCACCATTTAGTGGCAAAA GAGATCCCAGGAGATGTATTTGCTTTACAACGTGCAGAGATAGTTCATGACATATGTTTGTATTCTTTGAGAAGCTATAATTCCAAGCTCACGAGGAACA TTTTCTGTGATCTATCTTCTGTCAAGTTTGAAGACTTGGCTTCATGGCTAATGATAGCCTTTGTACTCTCTCGTGAGGTTCCTGTTACTTTTGAAAAGGT GTCTAAATTGCTTGCTGTAATGTATGTAGTTTCTGCCTCAAGTGAGCAATTTTCTCTGTCATCTTTTAGCAAAGTTTTGGGTGAAAATTGTTGGGCTTCA TATTTCCACCAAGCTTCCATTGGAACTCACCTTACTTACCGGTTTCTTTCAAATCTATCTGGGAGATACAAGAATAAAGTTCTTGTGAAATCTGACTATT GGATAAAATAAAAGAAAATAAAAGAAGGCACAGAGCCAAGGTTCTAACTGTCGAAGATAAGCTAGTGGTGCTAGGATGCAGAGATCTAGAGAGGAGGATT GTGGAAGCAGAGATGGAATTGACACTAGCAAAGAGCCAAGGTTACCTCAAAGGTGATGCCTTGAAAACACTTGAAGAAAGAGGAG BLAST |
Tissue | pods |
Gene name | LI_gene_178438; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403106
Blastp | Separase from Arabidopsis with 40.3% of identity |
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Blastx | Separase from Arabidopsis with 40.24% of identity |
Eggnog | extra spindle pole bodies homolog 1 (S. cerevisiae)(COG5155) |
Kegg | Link to kegg annotations (AT4G22970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425826.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |