| Id Trinity | TRINITY_DN50596_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_403109 |
| Sequence | ATTTTAAATTCCATTTTCTCTTCATTTCTATTTCTTTCACTTCCTTTCTCTCTCGCCACCACTAACCATGGCTTCCGCCGTCGAATCATCGCTAATTTCG AAGCTCCAATCCTCCGACACCGCCGGCATCTACTCCCTCGTCTCCGATTACCTCCATCCACTCCTCACCGCTACCAACAAATTCGACCAAACCCTAATTC GCTCACTCGCCAAGCGCTTCATCTCATTCCTCAACTCCTCCCTTTCCATTCTCCCCAAACGATTACCCGAACTCTCCAAATCCTTAAACGACGACGTTTT GATCGAGCTCTTCCGCGTCTACACTCTCTGCTTGGATTGCCTAGACACCGTCTCCTCTCAATTAGCTTCCAAGCCTTTCCAGGTTGAGTTCCAAAGACTT CGTTTGATTCACTGCTTTGAGAACTGTTCTCGGCATTGCGATGCGGAGGCTGAGGGTTTCCGAGTTTTGGAGAAGATTCGAGCAATGAATGTATCGAAGA AATCTGTGAGGAAAGGGAAGGGGAAGGTGGTGGATGGTAACAGTGGTTATGATAATGATAAGGATTTTTGCTTGCTGGCTTCGGAGATTGTGGTGAGCTT AGTGAGGTGCGCGGCTATGGGAACGGCTAAGGAGGATGAACACTTTAAGAGGGTGCTTGATTTAGTTGAGGAATCAAGGCCATGGTTCAGGGGATTAGAT GTCAATTCATATGAGAAGTTGCATAGGATGCTAGTAATTCAGTTGGGTAAATGTGCTTTAAATTTTTTGGGGACAACATTTTCGGATAAAGATTTGGTAA TTACGTTCAGCTGCATGACATTGACTGAGTATGTTAAATCTCCAATCAAAGATCAAGTCTTCAAGATTGCACACAGGATGTGCTCCTCACTGCTCACGCT GCAGGAGAATAAATCCTTGTATATCATGGATATACTGGACTGTGTTGCTCATGAGTGCAAGGTTGTACAAGGAAATGCTGGAACAGATTTTGTTGAACTC ATATATTATTGTGTCTATAAATGTCAGGCTACTGCAAATGCAAGTTTTTGTAGTACATTTGCAGCATATCTGAACAAAGTAGCAATGCACTTTAAACAGG TTATGATACCCATTAACCCAATACTGAGGCTTTATGCTGCTGGGTTGCTCCTTGTCAGTTGTAATTTGATGTCCAAAGCTGGAGATCTTGCATATTCTGG GAGTGCAAAATTTGAATGTTTGCATGGAACATTAATCGAAAATGACAAAATACTACTGAGTTCACCAGCCTTGCTTAGTTCCCTGCATATTTGCAGCAAA AGTAATTGTATAACATCTGGTGTTAAAGACAAACATTTTGTTGGTCAAGCATGCACACACACAGGATCTGATTGTGAGGTTTCTCTGACTTACATGCCAT CTTACTCAGAGGCATTGAAGTTTCTATGCCACCCACTTGCTAAATCAGTTAACTCAGAAAGGCAACAGTTAGTCATGGAAGAAGACAGTGGTTCTGCTTT GGCTATGCTGTCCACCATCCAAGATGCATTTCATATCCTTTGTCATCTTATTATTTCTAGTCCAAGCTTTGCATCTGAAAAAAACGGGGATGGATTTGAT GAAAAGAGTGGAACAGTACTTAATGTAGCTTTAGCAGCCTTCACCCTGTCCATCAAAGCAAATCTTAAACTCCAGGAGAGCACACAGTTAATTAAGCAGA TAATAGCTGGCAAATGGGTTGAAATTGGAGGGATTAAATACATAAGTGCTGCTCTCTACAATATTGCTGTATTTTTGTACAAAAACAAGAAACCAAAAGA GGCATCAAAGGTTCTAAAGTTGTGTTGTAAAGCATCATGGATCTGTGTTAAATGTCATTGTGGCAATCTGTCCGAAGTTGATTTGAAAGATACTGTCACA GAGGTTTACACAAGAAGTGCTTTACTTCTAGTTATTCTCCATGAACTCGACAGTTTTAAGATTAGAAAGAATATGATAAAGATCCTTAAAAATTGGTCCA CGGCTAATGATTTGTTTCAGAGGTTGCCAGCACCTATACCTGTAGTGAAGCAGTGGGTGAAGATACAATGCAAATGTGCTAAGCATGTGGATGAGAGGGC TGATTTTCTTAGCTTGTACTATCTGATGTCATCTTCTACTGAATTGTCAAAGAGTAGCATTGGCATGATCTTGGAGCAGGAACTGACTGCATATGAGGAA ATGAGCTTTAAATACCCAGAATTCTGTCAGAAAATGCAAATGAAAATCACTGGTTTCCTCCTGCAAGATATATATGTTACTCCAGATAGTTCTTTTAAAA AGGCTCAAACTCTAGTGAGAGAGGCAAAGGCATTAAGGGTTGGTGGCATAGGTGGCCTCAAGGACTGCATTCAGTGTCTGTCAACAGCAATAACTATCAT GAAGGCGGCATCTAGTGATCTGTGTACCAACAAAGGTCCTATTGACCATCAGTTATCTGTGGCGTATTGCCTGCATGCACTATGTACCCAGGAAGCTGAA CCTAATTCAAAGCAAATCTTTGAAGATGTCAAGGCTGCTTTGGATATATGGTTGAACATGTTTCGTCTTGATTGCTTTGAAGAGGGAGACTGTTCTGCAA TGCCAGACAGTATAATGATTTTACTCTATAACATGATTGATTTAATACACTTGAAGGGTTTCATGGACCTCTCTGCTGATGCTTATCAGCTGGTGACTAG AATATTTAAATTGAAGAAAGTCCCAGTTGAGAAATGGTTGACCTTGCTGTGGGAAAGTAGAAGGCTAAGTCATGCCCTTTGTGTTTCACCAGTAAATGAA GCATTCATTATGACTTCATCTCATCAATTTAGTGAACTTTCGAACATTGATTTCTGGATACGTCATCTTCAAGGAAACAAATCATCATTACTAGGCTTTC AGCAGAATTTTTCATTTTTGTTTGCTAGCTCTCATATGCGTTCTTGCAGTCAAGGGAGCTCTTTTCAAACAGACATCACAGTTGATGAAGTCCAAAGGGC TGCACTTCAGCTGATTTCAAATGCTCCTGTTTCAAGTCATTCAACTTTTCTTGCTGGTTATCTATACTATGATTTGTGCCAAAGACTAGTTGCAAATGGA CAGTTAATAGAGGCACTTTCATTTGCAAAGCAAGCTCATAGATTACATGCTGAACTCTTCCAACGGAAATTTACACGAAATGTTCAGCATCAGAATGAAA AGCACAATGTAATGATTGATTTCTCAAAAAACCTTGGGGATGAGGTTGAGAAAATTGGAGTGAAAATATCAGCTATCCGGGATGTTTTTCTATTTGATTC TATATCATGGGACTTGAAAGACAGTTATCTTAGTCCATGGAAAATCTTGCAGTGTTATCTTGAGAGCACTCTTCAGGTAGGTATCATCCATGAAATGATT GGAGATGGAGGTGAGGCTGAAACTTATCTCCAATGGGGGAAAGCCATATCCTGTTCACTACAGTTGCCTCTGTTTATGGTTACTTTCTCTTCCCTCTTAG GAAATCTGTATGTTAAGAAAAGACTATGGGATTTAGCAGAAAAGGAACTTCAAAGTGCTGAGCAGATTTTAAAGGATGGCTTCACAACATTTTCTTGCTC AAAGTGTAAATTGATGCTTGAAGTGACTCTGTATCAGTATCTTGGGGATTTGTGTCAACATAAATTTGAGACTTGTACAGGGGTTATTTCTGAAGTTACT GCAAAAAATTGGTACACATCAGCTCTGGACAAACTAAATCTTTCTGAGTGGAAAAACCCTCTCACCTGTCCAGAAGAAGGCAATGATGAAACTGCACAAG ATGTAACATGTGGTGGTAAGATTTGTGCTTGCCTAACAATAAATGAGGCAGGTGGAAATGTGACGGAATCCATGAAAGCAGGTCCAGAAACCAAGACTAG AGCAAAACAAAATAGAAAGACTAAGAATGCTGCAAAAGTTTTACGAAAGGAATCAAACTTGGGAGTTGAGGATAAACCAAGGATAACCCGTTCTAGATGC CGTTCTTCTCAGAATCAACATATTAGCATTTCCAGCAAGTCAGATGTTGGTGAAAGTCTGAAGGGGAACAATATATCTGATTCATCTGGCATGCTTCTTC AGAAGGATTCAGTGTTGAACAAGGAAGGTTGCACTGTTGCTTCAAGGTATTCATTAAATTGCGATTCCAAAACAAGGTGTTGGCACTGTCTTCCGCCTGA AGTTATGAATTCTGGGTTACTAAACAACTTTATCAATCTTAAATGGGAGTTTGTCCGTAGACAACTTTCAATGAATCTACTCACACGATTAGTGAAATGC TTTTCAATGGGAGGTCACATTCATGAAACATGTAAAATTCTTCTAAGAAGCATATCAGTTCTGGTCAGCAGAAATCCTTTCCATCAGACTTCTTCTGTTT CTGTAGATTATTTTCACCATTTAGTGGCAAAAGAGATCCCAGGAGATGTATTTGCTTTACAACGTGCAGAGATAGTTCATGACATATGTTTGTATTCTTT GAGAAGCTATAATTCCAAGCTCACGAGGAACATTTTCTGTGATCTATCTTCTGTCAAGTTTGAAGACTTGGCTTCATGGCTAATGATAGCCTTTGTACTC TCTCGTGAGGTTCCTGTTACTTTTGAAAAGGTGTCTAAATTGCTTGCTGTAATGTATGTAGTTTCTGCCTCAAGTGAGCAATTTTCTCTGTCATCTTTTA GCAAAGTTTTGGGTGAAAATTGTTGGGCTTCATATTTCCACCAAGCTTCCATTGGAACTCACCTTACTTACCGGTTTCTTTCAAATCTATCTGGGAGATA CAAGAATAAAGTTCTTGTGAAATCTGACTATTGGATAAAATAAAAGAAAATAAAAGAAGGCACAGAGCCAAGGTTCTAACTGTCGAAGATAAGCTAGTGG TGCTAGGATGCAGAGATCTAGAGAGGAGGATTGTGGAAGCAGAGATGGAATTGACACTAGCAAAGAGCCAAGGTTACCTCAAAGGTGATGCCTTGAAAAC ACTTGAAGAAAGAGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_178438; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_403109
| Blastp | Separase from Arabidopsis with 38.96% of identity |
|---|---|
| Blastx | Separase from Arabidopsis with 38.54% of identity |
| Eggnog | extra spindle pole bodies homolog 1 (S. cerevisiae)(COG5155) |
| Kegg | Link to kegg annotations (AT4G22970) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425826.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |