Ll_transcript_451448

• Id Trinity: TRINITY_DN50600_c0_g1_i12
• Name Transcript: Ll_transcript_451448
• Sequence: ATTAGTTTAGATTAATGTTATTTGTTTGCTCCTTACTTTTATACGGATGAAATGAGAAAATGCTATTGGTTTCAAAACAACAAGTCTTTATCCCGATAGT TCTGGTCGGCTGCATGAATTCAACGACGTCATAATGTTCTGTAATAAATCATGTTCATTGTCGAAATATTGATCTCTAAGTCTTTCTTAATTATTTTGTC GGTCTTTTTCTTGATCTCCCTTCAAAACAGCCAAAGTACTTTTTAAATAAGCTTCACATTTCTAGCTTCTTAGAAGATGTTTTTCTTATTAAAAAAATCA TATTTTTTTTTATATTTCAAACTAATTTGCCAAACATGTCAGATTAACCTCGAAACAGTTTTTTCTTCCATAAAAGAGCTGTTTTCTATGGAATTAATCT CTCCCTGGCACCTGCTTTAGGCTTATCTGTTGCTTACTTCCTTATGTTTTGTCAAGTTCATTCCTTCGATCTCAATTCGTTGGAGGATTGGGAGTAACGT TCGCATCATCTTGTTCCTTTCTTATGTGCACAAGATACTTACTCTCTTTACAGGCCAAGTATCTGTAATTTACCATATGTTTGCTAATGTTCCTTGCTGA CGTCTTTTACTTAATTTTCTTGGATGTTAATATTTCATCTGTGATCAGTCTTACCATATATTGTTTAACCTTTTTGCAGAAATACAGCAAAAACATTTTA TGCTGCTAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCGCTTCAGCCTGATCTGGAACAGAAACAGAAATATGCAGTCTGGAAAGCAGCAGATATA AGAAAGGCTTTGAAAGAAGGAAGGAGGCCTATCGCTGGCCCACCTAATGGTGACGAGGATCTGTCAGTTCCTTCGAGTACTGCTAGTAATAGATATGATC TCGGGACTAATGAAACCACTGTTACCAGCTCTGGACCAGAATCTGATCTTTCAACTAATTATCATAACCCGGTCAACTACCAGAATCTGCCAAGCACTCA TCCTGCACCTAAATTTCATGACACTGTTAACGACAATCATTCTACAAACATTCCACCATCTGTGCAGTTTCATGAGGGAGTAAATAATTATAAACATTCT TCCAATGTTTCTCCATCATCAGACCCTTATGCATCTGCAGGTTATCCTTCCCAAGACTACCATCGTCCTCCATCTTCCCTGGACTACCATCCTCCTCCAC CTTCCCAAGACTACCATCCTCCTCCACCTTCCCAAGACTACCAGCCCCCTCCACCTTCCCAAGATTACCAGCCCCCTCCACCTTCTCAAGATTATCATTC TCCTCCATCTTCCCAGGATTACCATCCTCCTCCGCCTATGAGATCAGAAACTTCTTATCCTGAGCCCTACACCCATCAGCAGTACTCACCAAAGAGTTCA CAGCATTTAGGTCCTAACTACCCGTCTCATGAAACTTCCTCTTACCCCAATTTTCAGTCGTATCCAAGTTTTACCGAAAGCACCCTACCATCAGTCCCAT CAAATTATATGTATTATCAAAGTTCTGATCCTTCATTCTCTTCCCAGTCAGCTCCACTTACTACAAACCATCCATCAAGTATCCAAAACAGTTCCAGCAG CAGAAATGGAGTTGTCTTGGATCCTACCCCAACTGCTCCAACATACCAGTATGACAGTAACTACCAGCCAACACCTGAAAAAATAGCCGAGGCACACAAG GCTGCAAGATTTGCTGTTGGGGCCCTGGCATTCGATGATGTGTCTGTTGCAGTTGACTTCCTAAAGAAATCACTTGAGTTGCTTACAAATCCATCAGCTG GTCAGTGAGATTTTGTGGCTACCTACCTAGTGTGGATTTCCATGGTGTTTCTACCTATTATTTACATGTCTCCTATTGTAAATATTGGTATATTACCATT CATTAAGGTGTGAAGATTATTAAGTTCACTTTGTTTGTCAAGGGATGTGTAAGATATAAATAGGAATATGCCTGCTTGATTAATTCCTGTTTGGGTCTCT GAACTCGGATTGTGCTCTCGTGCATTCATCTATTTCCTTTGAGAATTTGAATCTCAGCAGCGAAATTTCTTTAGTGTGTGTGAAGATTCTTGCTTAAGAA GTTTCATTTCAGAGATTAGTACAAATTGGTTTTGCC
• Tissue: pods
• Gene name: LI_gene_178453;
• Additional information: details;

Expression of Ll_transcript_451448

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451448

• Blastp: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 from Arabidopsis with 56.29% of identity
• Blastx: Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 from Arabidopsis with 55.69% of identity
• Eggnog: Vps20-associated 1 homolog (S. cerevisiae)(ENOG4111H3M)
• Kegg: Link to kegg annotations (AT4G26750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435643.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;