Ll_transcript_451418

• Id Trinity: TRINITY_DN50603_c2_g2_i7
• Name Transcript: Ll_transcript_451418
• Sequence: CATCTCTTTAGATATATTTTATTCTCTTTTATTTGTATGAGAACTTGAATTAATTATACCGTGTCCAATTGTTAACGACACTGTGACCACAACCTTTCAC ATTCTCCGACCGCCATGGCTAGCCGCAGTCACCGAAAACCTCCACCGGAAAATTCAAACGCCGGTTATCATTCAAAGCGGAGAATACCTTATCAATTAAA ACCCTCAGCATTATGGTCTCACACTAAACGGCGCAGATTCAGTTCAAATCCCCAAACCGTGACTCGAGACACCAATAACCCTTCTCGGCCGAACCGGTTC GAACCATTTCGTTCTTCGTCTAAGTCTCGCAGAAGGAAAAGGGATGAAAAATCAATCAGAAGCGGTATTGTTGAAGATTGTTCTTCTAGAAGATGGGCTT TTTCTTCCGCAGATTGTTCTAACTACAAGGATAAGGTGGTAGTTGTTTCATACAATATACTTGGTGTTGACAATGCATCAAAGCATATGGATTTGTATCC CAATGTTCCACGTCGTTACTTGGACTGGGATAGGCGGAAAGGACTCATACTTGAAGAAATCGATAACTATAGTGCAGGCATACTGTGTTTCCAGGAGGTT GATCATTTTAATGATTTGGATTATCTTTTCCAGAACAATGGCTTTAAAGGTGTTTACAAGGCCCGCACAGGGGAAGCACTTGATGGGTGTGCTGTATTCT GGAAAGATAATTTATTCACTCTTTTGGATCAAGAAGATATAGAGTTCCAAAGATTTGGCCTCCGTAATAATGTTGCTCAGCTTTGTGTTTTGGAGGTGAA ACATGATGAACTAGAATCTGATACATGTGCCCTAACAGAAGTGACACCATCAATCAGAAAAAAAAGATTTGTGATCGGAAATATACATGTACTGTTCAAC CCAAATCGTGGAGACATCAAACTTGGCCAGGTCAGACTTTTACTTGATAAAGCCTACAAGTTATCACAGAAATGGGGCAGCATCCCTGTTATTATTGCTG GGGACTTAAATAGTGTTCCACAGAGTCCAATATATGAATTCTTGGCTTCATCCAAGTTAGACATCCAATTACATAATCGCAGAAATATATCAGGACAGCT TGATATCGAGTCCAATAACAGAGTCTTCAGATCACAGATTGGTGATGAAGCTAGGTT
• Tissue: pods
• Gene name: LI_gene_178490;
• Additional information: details;

Expression of Ll_transcript_451418

FPKM

• PAB: 2
• PNAB: 4
• PS1: 7
• PS2: 3
• PS3: 3.9
• PW1: 3.5
• PW2: 3.8
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451418

• Blastp: Carbon catabolite repressor protein 4 homolog 5 from Arabidopsis with 60.57% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 5 from Arabidopsis with 63.2% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT1G73875)
• CantataDB: Link to cantataDB annotations (CNT0000945)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448406.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;