Ll_transcript_448940

• Id Trinity: TRINITY_DN50608_c1_g1_i2
• Name Transcript: Ll_transcript_448940
• Sequence: TAATAATGGAACACTGTATATGCCGTTATAGAGAAATTAATCACGTGAGATGCGTCCTGCTCTCTGACACATAACTCCTTTTAGACACTGTATCTGTATT CTGTATTCTGTACTCTCTCTCTTCATGCCAACAATGCCTTTCTTCCTCCTTCCTCTTCTAATATCTGCATGCCTTACCATCTTCTATTTCTTCACACCAT TTAACTTCATCAACACACAACAATAGCTAACAGAACACTCTCATTTCTCTTTCTGTTTTCGCTGCCATGCCTCTTTCCTTCAAATTTCTACTCTTCCTTC TCTTCTGTGCTATTTCAGAGCAAACCAATGAAAACCCAGAAACAAAGTCTCTCCTTTCCTTCAAAAACTCTCTCCACAACCCCTACCTTCTCTCTTCATG GAACCCTTCAACCTCGCACTGCGACTGGCTTGGTGTCACGTGCAAACTCGACCGAGTCACCTCCCTCTCTCTTCCTTCTCTTCACCTCAAAGCCTCACTC TCTTCTGCTTCTTCACTTTTCTCACTCTCCTCCCTCGCTATACTTGACCTCACCGGTAACCACTTCTCCGGCCAACTTCCACCTCAGCTTGGTGGGTTAA CTCAGTTGGTAACACTCAAACTCGGTTCCAACTCGTTTACCGGAGTAATCCCACCGGAGATTGGAACCTTGACGAAACTCATCACCCTCGACCTCGCCGG CAACGCCTTCGCCGGGAAGTTACCGGAGGCAATCGGGAAGCTGAGCCGGCTCCAGTTCCTTGACCTCAGCAACAACTTCTTCTCAGGTTCTGTACCAAGA CCTCTCTTCACCGGAGCACTCTCTTTGATTTCTCTTGATATCTCAAATAACTCGTTTACCGGTAAACTGCCACGAGAAATTGGGAACTTGAGGGACCTCA CTGCTCTTGGTGTTGGGAATAACAAGTTTTCAGGGACGTTGCCTAAGGAAATTGGAGAGCTCTCAAAGCTTGAAATTTTGTATGCAAGTTCCTGTTACAT TGAGGGTCCATTGCCTGAGGAAATGTCAAAGCTAAAATCTTTGACCAACCTTGACCTCTCTTACAACCCTTTGAAGTGTTCAATCCCAAAGTTTATTGGG GAGTTGGAGAATCTGATAATTCTGGACCTTGTATTTTCTGAGCTTAATGGCTCAGTGCCTTCTGAGTTGGGAAATTGTAGGAACTTGAGGTCTGTCATTC TTTCTTTCAATTCACTTTCAGGGTCACTTCCTGAGGAGCTTTCTCAGCTTCCTATAATAACATTCTCAGCTGAAAAGAATCAGCTTCATGGGCCTTTGCC TTCTTGGCTTGGACAATGGAGTCATGTTAAGTCTCTATTGCTTTCTGCTAACAGGTTTTATGGTTCAATTCCTCCTGAGCTTGGGAATTGTTCTGTGATG GAGCATCTTAGTTTGAGTAGTAACTTGTTGACAGGTCCTATACCTGAGGAGCTTTGTAATGCTGTGTCACTTATGGAGATTGATCTTGATGAAAACTTCC TTTCTGGTACAATTGAGAATGCATTTGTCAAGTGCAGGAACCTAACTCAGCTTGGTTTGATGAACAATCAGATTTTGGGTTTCATACCACACTACCTCTC CGACATTCCGTTGATGGTGCTAGACCTTGATTCGAACAATTTCAGTGGGAACATACCTTCTAGTCTGTGGAACTCATCCACCCTGATGGAATTCTCTGCG GCTAATAACCATTTGGAGGGTTCTCTACCTATGGAGATTCGGAATGCAGTTACTCTGCAGAGGCTTGTTCTAAGTAATAATCAACTCACAGGTACAATAC CTAAGGAAATTGGAAACTTGAAAAGTCTTTCTGTTGTTAATTTGAATGGAAATATGCTTGAAGGGACTATTCCAATTGAGCTTGGTGACTGCATTTCTCT TACCACATTGGACCTGGGAAACAATCAACTCAGTGGATCCATTCCTGAGAAACTGGTGGAGCTGAGCCAATTACAGTGCCTGGTTCTTTCTCACAATAAT CTCGCTGGTTCTATTCCTGCCAAAAAGAACTCTTCATATTTCCGACAACTCATCATACCTGATTTGAGCTTTGTTCAACACCTTGGTCTACTTGATCTTT CCCACAATAGATTATCGGGCCCTATACCTGATGAATTGGGGGAATGTCTGTTGGTTGTAGATCTATTACTTAGCAACAACATGCTCTCTGGTCCTATTCC TCAATCGCTCCGGCACTTGACAAATCTCACAACTTTGGATTTGTCTGGTAATTTGTTATCAGGTTTAATTCCTCCTGAGCTTGGAGACGCAGTCAAACTC CAAGGCTTGTATCTGGGGCAGAATCAGCTGTCAGGTAACATCCCTGAAAGCTTTGGAAAGTTGAGTAGTTTGGTGAAGCTAAATTTGACAGGAAATAAGC TGTTTGGTCCAATTCCAATCAGTTTCGGAAATATGAATCAGTTGACACACTTGGACTTGAGTTCTAATGAGCTCAGCGGCAAGCTTCCGTACTCACTCTC AGGTGTGCAAAGCCTTGTTGGGCTGTATGTGCAGAAGAACAGGCTTTCTGGACAAGTTGGGCTGCTCTTCTTAAATTCCATGACATGGAGGATTGAAACA ATTAACTTGAGTGATAATTGCTTTACTGGGAGCTTGCCAGGATCTTTGGGAAACCTTTCATACTTGACAATTTTGGATCTTCATAGGAACATGTTGACCG GAGAGATTCCTTCAGACCTGGGCAATCTAATGCAGCTGGAGTATTTTGATGTTTCAGGTAACAAGCTATCTGGAAAGATTCCGGACAAGTTATGCAGCCT AGGTAATCTGAATTACCTTGATTTGTCTCAAAACAATTTGGAAGGGCCTATCCCCGGAAGTGGTATTTGCCAGAACCTATCCCAGGTTGGATTAGCGGGG AACAAGAATCTTTGTGGGCAGATGTTGGGAATTAAATGTCAGTTCAAAAGCATTGCTAGATCTGCATTGTTTAATCCATGGCGGCTTGCTGGAATTGCCA TTACAATCATATTGGTAACTCTATGCATTGCTTATGTTCTACATAGGTGGTTTAACAGGAGGCAAAGCGATTGCAAGGTACTAAAGGAGGACAAACTAAA CAGTTACAGGGATAACAATCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAATTG ACTTTGGTTGATATCCTTGAAGCTACTGATAACTTCAGCAAGACCAATATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTAACTAATG GAAACAAAGTTGCTGTGAAGAAGCTTAGTGAAGCCAAAACGCAGGGACATCGTGAGTTCTTGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAA CCTTGTTGCATTGCTTGGATATTGCTCAATGGATGAGGAGAAGCTCCTTGTGTATGAATACATGGTGAATGGGAGCTTAGATCTTTGGTTGAGAAACAGG ACTGGTGCCCTTGGAATCCTTGACTGGAACAAACGCTACAAAATAGCAACCGGTGCAGCTCGAGGACTAGCATTCCTTCACCATGGTTTCACACCACACA TCATTCACAGGGATGTGAAAGCCAGCAACATTTTACTCAATGAGGATTTTGAGCCAAAAGTTGCGGATTTTGGACTTGCAAGACTGATCAGTAACTGCGA GACTCATGTCACCACAGATATTGCTGGAACATTTGGTTACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAACAAGAGGAGATGTCTACAGTTTC GGCGTCATTTTACTCGAGCTCGTGACTGGAAAAGAGCCGACCGGACCTGATTTTAAAGAGATTGAAGGTGGGAACTTGGTTGGATGGGTTGGTCAGAAGA TCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCAACGGTTCTTGACGCGGACTCGAAGCGGATGATGCTTCAGGTGCTGCAGATTGCTTGTGTTTGCCT CTCTGATAATCCTGCAAACAGGCCTATCATGCTTGAAGTACACAAGTTCCTGAAGGGGATCAAAAGAGACTAGATGAATAATAAAAAGTCATTGGACGGT GTTATGGTTTTTAAAGTAATTTAGCTACAGATTGATCTAACAGAAGCTTTATTTCAGTAATCTAGTCATATATGTAGAGTGTTGTTATTTATACACATAA CAACTTTTGGTAGAATAATTTAATCATAATATGTAGACTTGTTACTATATATCTTTCTCATGCTGATA
• Tissue: pods
• Gene name: LI_gene_178527;
• Additional information: details;

Expression of Ll_transcript_448940

FPKM

• PAB: 0.2
• PNAB: 3.4
• PS1: 5
• PS2: 2
• PS3: 7.4
• PW1: 0.5
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448940

• Blastp: Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 58.94% of identity
• Blastx: Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 53.33% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT5G07280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427290.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;