Id Trinity | TRINITY_DN50608_c1_g1_i4 |
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Name Transcript | Ll_transcript_448942 |
Sequence | GTTTTTTTTCTTCTTCTTTTCATTTCCATGGCTATGTCCTTCTACTTTCTTCTGCACTTTCTCGTGTTCCTTCTCTTTTACGCCATTTCAGACCAAACCA ATGGAAACCCACAACAAACTTTGCTCCTTTCCTTCAAAAACACTTTCCACAACCCTCACATTCTCTCTTCATGGCACCCTTCAACCCCACACTGCCACTG GGTTGGGGTCACGTGCCAACTCGGCCGAATCAACTCGCTATCTCTTCCTTCTCTTCAACTCAATGCCTCACTCTCTTCTCTTTCTTCCATTTTCTTACTC TCCTCCCTCACTACACTCGACCTCGCCGGCAATCACTTCTCCGGCGAACTCCCCACTCAGCTTGGTGAGTTGACTCAGTTGGAAACACTCAAACTCGGTT CCAACTCGTTCACCGGAGTTATACCGCCTGAGATTGGGCTCTTGACGAAACTCATCACCCTCGACCTCGCCGGCAATGCCATCGCCGGAAATGTGCCGGA GACGATCGGAAACTTGACCCGACTCCAGTTCCTTGACATCAGCAACAACTTCCTCTCAGGTTCTGTGCCGAAAAATCTCTTCACGGGACCACTCTCTTTG ATTTCTCTTGATATCTCCAATAACTCGTTTACCGGTAAATTGCCCCGAGAAATTAGGAACTTGAGGAACCTCGTTGAACTTGATATTGGGAATAACAAGT TTTCAGGGACGTTGCCTAAGGAAATTGGAGAGCTCACAAAGCTTCAAATTTTGAATGCACGTTCCTGTTACATTGAAGGTCCATTGCCTGAGGAAGTGTC AAAGCTAAAATCTTTGACCAACCTTGACCTCTCTTACAACCCTTTGAAGTGTTCAATCCCAAAGTTTATTGGGGAGTTGAAAAATTTGATATTTTTGAAC CTTGTTTTTGCTGAGCTTAATGGTTCAGTGCCTCCTGAGTTGGGAAATTGCAGGAAGTTGAGGTCTGTGGTTCTTTCTTTCAATTCACTTTCAGGGTCAC TTCCTGAGGAGCTTTCTCAGCTTCCTATAATAACATTCTCAGCTGAAAAGAATCAGCTTCATGGGCCTGTGCCTTCTTGGCTTGGAAAGTGGAATCATGT TAAGTCTCTATTTCTTTCTGCTAATAGGTTTTATGGTTCAATTCCTCCGGAGCTTGGGAATTGCTCCGCGATGGAGCATCTGAGTTTGAGTAGTAACTTG TTGACAGGTCCTATACCTGAGGAGCTTTGTAATGCTGTCTCACTTACGGAGATTGATCTTGATCAAAACTTCCTTTCTGGTACAATTGAGAAAGCTTTTC TCAAGTGTAGGAACCTTACTCAGTTGGGTTTGATGAACAATCAGATTGTAGGTTCTATACCACACTACCTTTCAGGGCTTCCATTGTTGGCGCTGAACCT CGACTCAAACAATTTTAGTGGGAACATACCTACTAGTCTGTGGAATTCATCTACCCTGATGGAATTCTCTGCAGCGAATAACCATTTGGAGGGTTCTCTT CCTGTGGAGATTGGGAATGCCATTACTCTACAGAGGCTTGTTCTGAGTGATAATCAACTCACAGGGACTATACCTAAGGAAATTGCAAACTTGAAAAGTC TTTCTGTTCTTAATTTGAATGGAAATAAGCTTGAAGGGGGCATTCCAATTGAGTTTGGTGACTGCATTTCTCTTACCACATTGGACCTTGGAAACAATCA ACTCAACGGTTCCATTCCTGAGAGACTGGCGGAGCTGAGCCAATTACAGTGCCTGGTTCTTTCTCACAATAATCTCTCTGGCTATATTCCTGCCAAGAAG AACGCTTCATATTTTCGACAACTTACCATCCCTGATTTGAGCTTTGTGCAACACCTTGGTCTACTCGATCTGTCCCACAATAGATTGTCTGGTACTATAC CTGATGAATTGGGGCGCTGTATATTGGTTGTGGATCTACTGCTCGGCAACAACATGCTCTCTGGGAATATTCCTAGCTCACTCTCGCGCTTGACGAATCT GACAACCTTGGATTTGTCTGGAAACTTGTTATCAGGCGCCATTCTTCCAGAACTTGGAGATGCTGGCAAACTCCAAGGTTTGTATCTGGGGAATAATCAG CTCTCAGGTACCATTCCTGAAACTTTTGGAAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGAGAATAAGTTGTCTGGTCGAATTCCAATCAGTTTTG GCAACATGAGGCAGTTGACACACTTGGATTTGAGCTCTAATGAGCTCAGCGGCGAGCTTCCGTTTTCTCTTTCAGATATGCAAAGCCTTGTTGGACTCTA TGTACAGGAGAACAGGCTTTCTGGCAAAGTTTGGGAGCTCTTCTTAAGCTCTGTGATTTGGAGGATTGAAACAATTAACTTAAGTGATAACTCCTTCAAT GGGAACTTGCCAGGATTTTTAGGAAACCTTTCATACTTGAAAATATTGGATCTTCATAGGAATATGTTGACTGGAGAGATTCCTTCAGACCTGGGCAATC TAATGCAGCTGGAGTACTTTGATGTTTCAAGTAATAAGCTATCTGGAATGGTTCCAGACAAGTTGTGCAACCTAGGTAATCTGAATTTCCTTGATTTGTC TAAAAACAATTTGGAAGGGCCTATCCCAAAAGGCGGTATTTGCCAGAACCTATCCGGGGTTGGATTAGCAGGGAACAAGAATCTTTGTGGGCAGATGCTG GGTAAAAATTGTCAGTTCAAAAGCCTTGATAGATCTGTGTTGTTTAATCCATGGCGGCTCGCTGGAATTGTAATTACAATCATATTGATAACTCTATGCA TTGCTTATTTTCTATGTAGATGGTTTAACAGGAGGCAAAGTGATCCCAAGGAAATAGAGGAGCACAAACTAAATGTTTACGGGGATAACGATCTATATTT CTTGAGCTGTAGCAGATCAAAGGAACCTTTGAGTATCAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAATTAACTTTGGCTGATATCCTTGAAGCTACT GACAACTTCAGCAAGACCAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTAACTAATGGAAACAAAGTTGCTGTGAAGAAGCTTA GTGAAGCCAAAATGCAAGGGCATCGCGAGTTCTTGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAACCTTGTTGCATTGCTTGGATATTGCTC AATGGATGAGGAGAAGCTCCTTGTGTATGAATACATGGTGAATGGGAGCTTAGATCTTTGGTTGAGAAACAGGACTGGTGCCCTTGGAATCCTTGACTGG AACAAACGCTACAAAATCGCAACCGGTGCAGCTCAAGGACTAGCATTCCTTCACCATGGTTTCACACCTCATATCATTCACAGGGATGTGAAAGCTAGCA ACATCTTACTGAGTGAAGAATTTGAGCCAAAAGTTGCAGACTTTGGACTTGCAAGACTGATCAGTAACTGTGAGACGCATATCAGCACAGATATTGCTGG TACATTTGGTTACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAAAAAAAGGAGATGTCTACAGTTTCGGTGTCATTTTACTCGAGCTTGTCACC GGAAAAGAGCCCATTGGACCTGATTTTAAGGAGATTGAAGGTGGGAACTTGGTTGGATGGGTTGGTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTC TTAATCCAGCAATTCATGACACAGACTCGAAGCCGATGATGCTACAAGTGCTGCAGATTGCTGGTGTTTGCCTCTCTGATAATCCTGCAAACAGGCCTAC CATGCTTGAAGTACACAAGTTTCTGAAGGGGATCAAAAGAGACTAGTTGAATAATATGCCACTGCTTTATATACTAATTTAGCTGCAGATTGGTCTAACA GAAGCTTCATTTCAGTAATCTAGTCATATATGCAGACTGTTGTTATTTATGCACATAATAATTCTTTGCAGAATAACATAATGTGTACACTTTTTGATAT TTTATAACATCTCTTGATATAACTTATACTATAACTTTA BLAST |
Tissue | pods |
Gene name | LI_gene_178527; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_448942
Blastp | Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 57.74% of identity |
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Blastx | Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 57.42% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT5G07280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427290.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |