Ll_transcript_448939

• Id Trinity: TRINITY_DN50608_c1_g3_i1
• Name Transcript: Ll_transcript_448939
• Sequence: AAAACCTCCATCTCCAATTATGTTGGTCTTGCTGAAGTTGTCAGTAGCTTCAAGGATATCAGCCAAAGTTAATTTCAGAAGAGGCTGCTCAAACATTGCT ACATTGATACTCAAAGGTTCCTTTGATCTGCTACAGCTCAAGAAATATAGATCGTTATCCCCGTAAACATTTAGTTTGTGCTCCTCTATTTCCTTGGGAT CACTTTGCCTCCTGTTAAACCATCTACATAGAAAATAAGCAATGCATAGAGTTATCAATATGATTGTAATTACAATTCCAGCGAGCCGCCATGGATTAAA CAACACAGATCTATCAAGGCTTTTGAACTGACAATTTTTACCCAGCATCTGCCCACAAAGATTCTTGTTCCCTGCTAATCCAACCCCGGATAGGTTCTGG CAAATACCGCCTTTTGGGATAGGCCCTTCCAAATTGTTTTTAGACAAATCAAGGAAATTCAGATTACCTAGGTTGCACAACTTGTCTGGAACCATTCCAG ATAGCTTATTACTTGAAACATCAAAGTACTCCAGCTGCATTAGATTGCCCAGGTCTGAAGGAATCTCTCCAGTCAACATATTCCTATGAAGATCCAATAT TTTCAAGTATGAAAGGTTTCCTAAAAATCCTGGCAAGTTCCCATTGAAGGAGTTATCACTTAAGTTAATTGTTTCAATCCTCCAAATCACAGAGCTTAAG AAGAGCTCCCAAACTTTGCCAGAAAGCCTGTTCTCCTGTACATAGAGTCCAACAAGGCTTTGCATATCTGAAAGAGAAAACGGAAGCTCGCCGCTGAGCT CATTAGAGCTCAAATCCAAGTGTGTCAACTGCCTCATGTTGCCAAAACTGATTGGAATTCGACCAGACAACTTATTCTCTGTCAAATTCAGCTTCACCAA ACTACTCAACTTTCCAAAAGTTTCAGGAATGGTACCTGAGAGCTGATTATTCCCCAGATACAAACCTTGGAGTTTGCCAGCATCTCCAAGTTCTGGAAGA ATGGCGCCTGATAACAAGTTTCCAGACAAATCCAAGGTTGTCAGATTCGTCAAGCGCGAGAGTGAGCTAGGAATATTCCCAGAGAGCATGTTGTTGCCGA GCAGTAGATCCACAACCAATATACAGCGCCCCAATTCATCAGGTATAGTACCAGACAATCTATTGTGGGACAGATCGAGTAGACCAAGGTGTTGCACAAA GCTCAAATCAGGGATGGTAAGTTGTCGAAAATATGAAGCGTTCTTCTTGGCAGGAATATAGCCAGAGAGATTATTGTGAGAAAGAACCAGGCACTGTAAT TGGCTCAGCTCCGCCAGTCTCTCAGGAATGGAACCGTTGAGTTGATTGTTTCCAAGGTCCAATGTGGTAAGAGAAATGCAGTCACCAAACTCAATTGGAA TGCCCCCTTCAAGCTTATTTCCATTCAAATTAAGAACAGAAAGACTTTTCAAGTTTGCAATTTCCTTAGGTATAGTCCCTGTGAGTTGATTATCACTCAG AACAAGCCTCTGTAGAGTAATGGCATTCCCAATCTCCACAGGAAGAGAACCCTCCAAATGGTTATTCGCTGCAGAGAATTCCATCAGGGTAGATGAATTC CACAGACTAGTAGGTATGTTCCCACTAAAATTGTTTGAGTCGAGGTTCAGCGCCAACAATGGAAGCCCTGAAAGGTAGTGTGGTATAGAACCTACAATCT GATTGTTCATCAAACCCAACTGAGTAAGGTTCCTACACTTGAGAAAAGCTTTCTCAATTGTACCAGAAAGGAAGTTTTGATCAAGATCAATCTCCGTAAG TGAGACAGCATTACAAAGCTCCTCAGGTATAGGACCTGTCAACAAGTTACTACTCAAACTCAGATGCTCCATCGCGGAGCAATTCCCAAGCTCCGGAGGA ATTGAACCATAAAACCTATTAGCAGAAAGAAATAGAGACTTAACATGATTCCACTTTCCAAGCCAAGAAGGCACAGGCCCATGAAGCTGATTCTTTTCAG CTGAGAATGTTATTATAGGAAGCTGAGAAAGCTCCTCAGGAAGTGACCCTGAAAGTGAATTGAAAGAAAGAACCACAGACCTCAACTTCCTGCAATTTCC CAACTCAGGAGGCACTGAACCATTAAGCTCAGCAAAAACAAGGTTCAAAAATATCAAATTTTTCAACTCCCCAATAAACTTTGGGATTGAACACTTCAAA GGGTTGTAAGAGAGGTCAAGGTTGGTCAAAGATTTTAGCTTTGACACTTCCTCAGGCAATGGACCTTCAATGTAACAGGAACGTGCATTCAAAATTTGAA GCTTTGTGAGCTCTCCAATTTCCTTAGGCAACGTCCCTGAAAACTTGTTATTCCCAATATCAAGTTCAACGAGGTTCCTCAAGTTCCTAATTTCTCGGGG CAATTTACCGGTAAACGAGTTATTGGAGATATCAAGAGAAATCAAAGAGAGTGGTCCCGTGAAGAGATTTTTCGGCACAGAACCTGAGAGGAAGTTGTTG CTGATGTCAAGGAACTGGAGTCGGGTCAAGTTTCCGATCGTCTCCGGCACATTTCCGGCGATGGCATTGCCGGCGAGGTCGAGGGTGATGAGTTTCGTCA AGAGCCCAATCTCAGGCGGTATAACTCCGGTGAACGAGTTGGAACCGAGTTTGAGTGTTTCCAACTGAGTCAACTCACCAAGCTGAGTGGGGAGTTCGCC GGAGAAGTGATTGCCGGCGAGGTCGAGTGTAGTGAGGGAGGAGAGTAAGAAAATGGAAGAAAGAGAAGAGAGTGAGGCATTGAGTTGAAGAGAAGGAAGA GATAGCGAGTTGATTCGGCCGAGTTGGCACGTGACCCCAACCCAGTGGCAGTGTGGGGTTGAAGGGTGCCATGAAGAGAGAATGTGAGGGTTGTGGAAAG TGTTTTTGAAGGAAAGGAGCAAAGTTTGTTGTGGGTTTCCATTGGTTTGGTCTGAAATGGCGTAAAAGAGAAGGAACACGAGAAAGTGCAGAAGAAAGTA GAAGGACATAGCCATGGAAATGAAAAGAAGAAGAAAAAAAACAGATTTCTTTAATTATCTAAAATTGTAGATAATGTTAAATAGAATTAATAGAATTAGA AGGAGGGAACCGGAAAACAAGGTTAGGAACCAGGATCCTCTCCATTAATGGTTAGGCAAGTGATTTCTTTTACCTTATTTAAAGTTACATTTTCCTTTAT TTTTTTGATGTACTTGTCTCTCAGTACAGATGATCCTAAATACAATGTTGACATGAAGAATAAATGGTGTTGAGAGTGAGAGTGGTAAGTCAAAGGAGTA ATGTGTCTGACAGCAGCACGCACCTCACGTGATTACTTTCTTCATAACTCATAATGGACATTACTATTACTTGAGACCAAATTACACTAAACACTATCAT ACCTTAATTACATTTACTAGAGTTAG
• Tissue: pods
• Gene name: LI_gene_178529;
• Additional information: -

Expression of Ll_transcript_448939

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.4
• PS2: 0
• PS3: 0.1
• PW1: 2
• PW2: 0.4
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_448939

• Blastp: Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 53.2% of identity
• Blastx: Leucine-rich repeat receptor protein kinase EMS1 from Arabidopsis with 52.8% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT5G07280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427290.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;