Ll_transcript_449420

• Id Trinity: TRINITY_DN50609_c0_g1_i10
• Name Transcript: Ll_transcript_449420
• Sequence: CAGAATCTATTTTTTTACCATGTTACTTCAATTTCTTCATCTTCTAAAACACACTCCATCTTCCTCTCTAACCACTTTGCCCTAGATCCATGCCTTCCTG AGTTTCAATGATACCCTTTTTTACTATTTCTTCTGGGTTATGGAAACACCTTCAGGAGCTATATATTCAAGGCCCATGTATTGGAATCTCACTTTCACTA TCATAAGGTTCTTAGGATCTGACTTTTGTGAATTGTAGCCGAGTTTGGTGGTTACGGGTACTGAAGAAAAAGATACTAGGATGGAGGGATATTGGATATG CAATTGAAGAGGTGAATATTGAGATTGGAGGTTGCTTTTTGTGGGAGGAGTTGGTGTGCTTATATAATGGGTGGCATGTGTTGCAAGCCATCTGCTATTG AGGATAGTAAGGAGAGCCCGAGGGAACGTTTATCAAGCAAGGCTGTGTTGGAGTCTCGTGTATCTAGGGGGACTTCGTCAAGTAGGGAGGAAGTTTATCG AGTAAAGGATAGATATGATAATAATGATGTGAGAGTTGCGTTGATTGACAAGCAAGTGAGTAATGGTGCTATTCGAGTGCAAGTTGATAATTTCGAAAGG AAGAGGGAGAAAATGGAATATGTTATTGCTCCGCATCCAGGGATTGGAAGTGTTCCCAAAGCCATGGAAGGGGAGCAGGTTGCAGCTGGATGGCCCTCAT GGCTGGCAGCAGTTGCCGGAGAGGCTATCAAGGGATGGTTGCCTCGGCGTGCAGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAA TGTTTACAGGGCTCGTGATCTTGAACAGAAAAAGATCGTTGCTCTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGGTTCATGGCAAGG GAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTTGAAGGCCTAGTTACATCAAGGATGTCTTGCAGCTTATACCTTGTTTTCGAGT ACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACTTAAGTTTACAGAAGCTCAGGTTAAATGTTACATGCAGCAAATTTTACGTGGACTTGA TCACTGCCATGCCTGTGGTGTGCTACACCGTGATATTAAGGGTTCTAATCTTTTGATTGATAACAATGGAACATTGAAGATTGCAGACTTTGGTTTGGCA AGCTTTTATGATCCCAATCAAACTCAGCCACTAACAAGCCGGGTTGTCACTCTTTGGTATAGGCCGCCCGAGCTTTTACTTGGAGCTACGTACTATGGCA CTGCTGTAGATTTATGGAGTACGGGTTGCATACTCGCTGAACTGTACGCGGGCAAACCTATAATGCCTGGAAGAACTGAGGTCTGTGTGCTTCAATTTTT TTAGTTTAAATGTGGCATTTTGAGCATTTCCTTTGATATGTTAAAGTAACTATTTTGCACCACAAATATTTGTCATTTAGATTGTACTTGTGTATTACAA GGGATGGGTTTCCAAAGTTTATCAAACAATTAGGCTGTGTTAACAAAAAATATTGATTGAAGGTGAAAATATAATAATGCAAATATATTGTCTTCTTTAT AATATTCTACCTGTCTTCTTTTTTAATTGTATGAACTTAGCTTGGTTGAATAATACAGCATTAGAAACTACAATTTTCTGTCTTATAGGTGGAGCAGTTA CATAAAATTTTTAAACTATGTGGTTCACCTTCTGAGGATTATTGGAAAAAATCGAAGTTGCCTCATGCAACAATATTTAAGCCTCAGCAGCCCTATAGGC GTTGTGTTGCTGAAACGTTCAAGGACTTTCCTGCATCTGCAGTTGAACTGATAGAGACTCTTTTATGCATAGATCCTGCTGATCGTGGAACTGCAGCATT TGCCTTGAAGAGCGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCTTCAAGCTTGCCAAAGTATCCTCCGAGCAAAGAATTTGATGCCAAAGTATGG GATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAACAAGGGCCAGATGCATGACCTTGAGAGAAGAGGAGCAAGGGAGTCACGAGCTGTTCCTGCACCTG ATGCCAATGCTGAACTGGTCGTGTCAATGCAGAAGAGACAAGGGCTGAGTAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCACCCTGAAGAAGTTGC TTCTGGATTTCCCATCGATCCCCCTAGGCCATCACATGCTGTACAAGTAATTGTTGACCCTCAAGCACATCAACATAAAAGAGCCTCCCATTCAGGTCCA CTGACTCACCGCGCTGCATGGGCTAAAGCTGGGAAGAACCAGGATGACGCTCCAAAGATTTCGATGGGGGGCGACTTATCAACAATGTCAGGCTTAATTG CATCGCGAAGGAGTGCGTTGTTTGATGATCGCAGAGAAAGGTCTGGATCGTCACAAGCCGAGGCTCCAAAACCAATAAGCAGGTTCCCTGGATCATTCAA GGATGCCTCTGAGTCGTTGATGCAACAAGATCAGAAGCATCATGCACATGCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAACAAAAACACTATTCTTGTT GGTTATGGGTCGAAGGGGCATAAAATTCATTATTCTGGACCATTGCTAGTTCCATCAAGCAACATGGATCAGGTGTTGAAAGACCACGATCGCCAAATTC AGGAAGCAGTTAGAAGATCGCGGCTGGACAAGGCCAAAATGAGAAGACTTCAAGCTGAAGGGAATCAGATAACCAATTCATTATTTGTTTCTGGTCGTTG ACACGTAGAGCTTGGCACAACAAAGCATCATTAGGAATATTTGATTCTTCCTCATTTTCCTTCTCTCTCTCTTCATTTTGCATGTACAACGAGCAAGTAC CCGTCGCAAAATGCCGCACGGCCATGTTAGGTATAACTATCTATAGCTTAGAAATCTTCCCTTTCACTGAATGTATCACATGTATTTTCCCCTCAGCTGC AATTTCTCATATATGGCCATTCTTGTAAAAAAGCTTATCAGCCTTAAGCTGTAGAATATTGAGGGAACAAGTCTTCCTTATGTTAACTTATGATATAGTA ACTATCATTGGAAGATGGCTAAGTATGTCTATTCTTCTGTCCTTTACTTTTCCCATCTTTCCAACATGCATCATCATTGCTTCAACATCTTGGTACCGAT ATACAAGTTTTTTCCTAGCAACTTCTGTTGTTGCTGTTAGGGACCGATACATTTTATGGTCCCGGATCGAGATAGTTGTGAGATTAACACTCGAGCTTGG GTGGTAGAAAGAGGGAATGTCCCTTATCTTAGGAAGATGCATATTATATAACACATAGTTTAGCCTAATACGTTTTCTTCAAAGCCCTTAATATAGGGAT GATGCATGAGGAAAATACATGTACATTTTTACCTTAATATAGGGTACCTAGTATGTACATTCTTACCTTAATATAGGGTACCTAGTATGTACATTCTTAC CTTAATATAGGGTACCTAG
• Tissue: pods
• Gene name: LI_gene_178531;
• Additional information: details;

Expression of Ll_transcript_449420

FPKM

• PAB: 0.6
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.2
• PS3: 0.3
• PW1: 0.1
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449420

• Blastp: Probable serine/threonine-protein kinase At1g54610 from Arabidopsis with 67.93% of identity
• Blastx: Probable serine/threonine-protein kinase At1g54610 from Arabidopsis with 66.01% of identity
• Eggnog: Cyclin-Dependent Kinase(ENOG410XPIR)
• Kegg: Link to kegg annotations (AT1G54610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425429.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;