Ll_transcript_449913

Id TrinityTRINITY_DN50613_c2_g1_i2
Name TranscriptLl_transcript_449913
SequenceCGCGCGCTTGGAATCTCGTACTCAGCTATTAACAAGCACTACAATAACCACGCGCCGATTCGGTGTTATCGGAGTTCACATAACACTAAGGCCATCGTCG CCGTTGAAACTAACTCCTCAACAATCGACGCCGCAAACTTAATCGCCACGTCTTCTTCGGAAAGATACCAAAACTATGATCGGTTACTTCCATGTCCATC GCACAAATCTACACCGAGAGTTGAGCACTTAGTTGTATCAGAAGGAGGAACTGTGTTAGAATTTATTTGCAAATCACTCCATCTTCCTCCTTTGTATGTC GCAGATTTGATCCAATTTGGAGCTGTGCACTACGCTCTTGTATGTCCACCGCCTCCTCCTAATGCTACTGAAGAACAAATTAGGATATTCAAAGAAGTAA CGGAACCTTCGGTTTTGCGAAAAAGAGCTTCAATCAAAGGCAAGACTGTGCAAAGGGCACAAAAAACTTTCCGTATAACTAGTGTCGATCAATTTGTTGA GCCGGGAATGTATATACGAGTTCATGTACATCCCAAACGCTTTCCCAGGTGCTATGAGATTGACTGGAGATCAAGGATAATTGCTGTGACAGAACTGTAT GTAGTTTTGGATAAACCTGCTGGTACTTCAGTAGGTGGCACTACCGACAACATTGAAGAACGTTGTGCTACCTTTGCAACTCGCGCCTTGGGCTTGACAA CCCCTTTGATGACTACCCATCAGATTGATAATTGCACCGAAGGCTGTGTGGTATTAGCCAGGACTAAAGAGTACTGCTCCGTGTTTCATGGCAAAATCAG GGACAAAATGGTGAAGAAGCTCTATCTTGCTCTTGCAGTTTCTCCTTTGCCAATTGGAATCATTACCCATTATATGCGTCCTACTAACATGGCTCCTCGA CTTGTTTCTGAAGATTCGAGCTCAATTTGCTGCCTGTAAGGCTCCATTAATTGGCGATTCTACGTATATGGCAGCGGCGATTGCAGAGATGGCTAATCCT GGACTTAATCCATTTGGAAAATACAA BLAST
Tissuepods
Gene nameLI_gene_178553; 
Additional informationdetails; 

Expression of Ll_transcript_449913

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_449913
BlastpRNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 66.55% of identity
BlastxRNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 66.55% of identity
Eggnogpseudouridine synthase activity(COG0564)
KeggLink to kegg annotations (AT4G21770)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418853.1)
PfamRNA pseudouridylate synthase (PF00849.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;