Ll_transcript_449914

Id TrinityTRINITY_DN50613_c2_g1_i3
Name TranscriptLl_transcript_449914
SequenceCGCGCGCTTGGAATCTCGTACTCAGCTATTAACAAGCACTACAATAACCACGCGCCGATTCGGTGTTATCGGAGTTCACATAACACTAAGGCCATCGTCG CCGTTGAAACTAACTCCTCAACAATCGACGCCGCAAACTTAATCGCCACGTCTTCTTCGGAAAGATACCAAAACTATGATCGGTTACTTCCATGTCCATC GCACAAATCTACACCGAGAGTTGAGCACTTAGTTGTATCAGAAGGAGGAACTGTGTTAGAATTTATTTGCAAATCACTCCATCTTCCTCCTTTATTTGAT CCAATTTGGAGCTGTGCACTACGCTCTTGTATGTCCACCGCCTCCTCCTAATGCTACTGAAGAACAAATTAGGATATTCAAAGAAGTAACGGAACCTTCG GTTTTGCGAAAAAGAGCTTCAATCAAAGGCAAGACTGTGCAAAGGGCACAAAAAACTTTCCGTATAACTAGTGTCGATCAATTTGTTGAGCCGGGAATGT ATATACGAGTTCATGTACATCCCAAACGCTTTCCCAGGTGCTATGAGATTGACTGGAGATCAAGGATAATTGCTGTGACAGAACTGTATGTAGTTTTGGA TAAACCTGCTGGTACTTCAGTAGGTGGCACTACCGACAACATTGAAGAACGTTGTGCTACCTTTGCAACTCGCGCCTTGGGCTTGACAACCCCTTTGATG ACTACCCATCAGATTGATAATTGCACCGAAGGCTGTGTGGTATTAGCCAGGACTAAAGAGTACTGCTCCGTGTTTCATGGCAAAATCAGGGACAAAATGG TGAAGAAGCTCTATCTTGCTCTTGCAGTTTCTCCTTTGCCAATTGGAATCATTACCCATTATATGCGTCCTACTAACATGGCTCCTCGACTTGTTTCTGA AGATTTTATTAAGGGGTGGCAGATTTGTCAACTTGAGGTCATGGAATGCAATCAGGTTCCTTGGCCAACTACTGTTATTCAGGATAAATATTGTATTGAA GACTGTGAGTGGCCTTCTAAAGATTATGCCTATGAGTGTAAAATCAAGCTTCTTACTGGTCGAACTCATCAGATTCGAGCTCAATTTGCTGCCTGTAAGG CTCCATTAATTGGCGATTCTACGTATATGGCAGCGGCGATTGCAGAGATGGCTAATCCTGGACTTAATCCATTTGGAAAATACAA BLAST
Tissuepods
Gene nameLI_gene_178553; 
Additional informationdetails; 

Expression of Ll_transcript_449914

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_449914
BlastpRNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 75.33% of identity
BlastxRNA pseudouridine synthase 6, chloroplastic from Arabidopsis with 72.67% of identity
Eggnogpseudouridine synthase activity(COG0564)
KeggLink to kegg annotations (AT4G21770)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019418853.1)
PfamRNA pseudouridylate synthase (PF00849.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;