Id Trinity | TRINITY_DN50619_c0_g3_i5 |
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Name Transcript | Ll_transcript_450574 |
Sequence | GTGTTCTTAGTCAATGTTTCTCCAAGAAACATGTTATTTTATCGTATACATGTATGGGATTATTGAAATAGTTTTAGTATTATTGAGATAGTTGTAGTAT TATTGAAATAGTGTGTCCTTTCATTTGACCCCACAAAACACATGGTATGGGATTTCCCTTCACAGGGAGGGGGAGGGAGACACCAGTGCTAATAAAACGA TGTCGTCTCCATTTCACCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCAGCCGACTTCCATCTCCAACTCGATCCCTTCGATTCCCCATCACC GGAAGACGCCGGTGATGGAACCGCCAACGCGTCTAGTAACAAAACCGGAAGAACCGGTCACCGGCGAAGCAGTTCAGTGGATGGTTCGTCGTCCTCGTTG ACAGAAGGGATTGAGGACCGGGTAAGCTCGCTGAATTGTGGACCGTTGATCCCAAACGAGCCAAGAGGATTTTGGCCAATTGACAATCTGCTGCGCACTC AAAAGAAAGAAAGGCTGATTATGTGTTAGAACTTGAAAGAAAAATTGAAACTCTTCAAACCGAGGCGACTACTCTTTCAGCTCAGTTAAATTTTTTCCAG AGAGATACAACTGGTCTGTCTTCTGAAAACACTGAGCTTTCGGTTACAGGCTATGGAGCAACAAGCCAAGTTATGTGATGCTTTAAATGAAGCACTGAAG AAAGAAGTTGATAGGCTCAAGATGGCTACTAGAGAGACAGTAACTCATGCTAATACCTATGCTTTTGGAATGCATCAATTTTCATATTCTCCAACTCCGT TCTTCTCACATCAGCCACAGCAGTGGCCGGGCAGGCTTCAAGCACGCCATACAAATGCCGCAGATGCATCACGCATACACTCTCATCTAATATGTCAGCT CCCCATTGGCCTATGCTTAATCCAGCCACTCCATATGATTTTTCAGAAATGTTACCGAATGATTCTATTGGCCAATTTCAGGGGCTGGACATAAGCCATG TGGTTTCTCAAAATCAGATTCCTGACAGTCCCTCCATTTCTGTTAATAAAATCATTTGTTAGACTTCAAATTAATGTCTTGAGCTCAAAATACCAGAGAT GTTGTAATTTCAAGCTCATTCTGTTTGCACACGCCTATTTGCATTTGGCATGGAATAGCAGGAACAAGGATACATGTATACATTCCTAATTCAGCTAAGG TGATC BLAST |
Tissue | pods |
Gene name | LI_gene_178603; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_450574
Blastp | Transcription factor RF2b from Oryza sativa with 54.9% of identity |
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Blastx | Transcription factor RF2b from Oryza sativa with 75% of identity |
Eggnog | Transcription factor(ENOG410YGG3) |
Kegg | Link to kegg annotations (4332761) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415777.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |