Ll_transcript_449407

• Id Trinity: TRINITY_DN50622_c2_g1_i17
• Name Transcript: Ll_transcript_449407
• Sequence: TGTCACACTAAAACTGAAAAGAGTGAGTGAGTTCAGATTCTGAGATTCAGCTATGAATGCTCTTGCAGCCACCAACAGAAACTTTCAACGTGCAGCTCGC ATTCTTGGTTTGGATTCCAAGCTTGAGAAGAGCCTTCTCATCCCCTTCAGGGAAATCAAAGTTGAATGTACAATTCCAAAAGATGATGGAACTCTAGTAT CCTATGTGGGTTTCAGGATCCAACATGACAATGCTCGTGGACCTATGAAAGGAGGAATTCGTTATCATCCTGAGGTTGATCCTGATGAAGTGAATGCTCT AGCTCAGCTAATGACATGGAAGACAGCTGTAGCAGACATTCCTTATGGAGGAGCAAAGGGTGGGATTGGCTGCAATGCAAGGGACCTGAGCCTAAGCGAG TTAGAACGTCTCACTCGTGTTTTCACCCAAAAGATCCATGATCTCATCGGTGTTCAAAGGGACGTTCCTGCCCCTGACATGGGAACTAATGCGCAGACAA TGGCATGGATTCTTGATGAGTATTCAAAGTTTCATGGTCACTCACCCGCAGTTGTGACTGGAAAGCCTATTGATCTTGGAGGTTCATTAGGAAGGGAAGC TGCGACAGGACTAGGAGTGATTTTCGCAACAGAGGCTTTATTTGCTGAGTATGGGATGTCAATTTCTGGGATGACATTTGCCATCCAGGGCTTTGGAAAT GTGGGCACTTGGGCTGCTAAGTCCATTTATGATAGAGGGGGCAAGGTGGTAGCAGTGAGTGACATCAGTGGTGCTATTACAAACCCAAATGGAATTGATA TTCCCGCGCTTCTGAAACACAAGGAAAGCAATGGAAATTTGACTGAATTCTCGGGAGCAGATGCTATGGATCCAAATGACTTACTTGTTCATGAATGTGA TGTTCTCATCCCATGTGCCTTAGGAGGAGTTCTCAACAAGTATGTTATCTCGCTCACCTAATTTCGGAAATCATCATCATAGTTAATCAAATAGATTGTA GTTTTTTACTGAGTTTTCAAATTTCCGTTCTGGAGAACTTAAACATTTTTTCTTAATCTAGAAGCACTTCAACTTAATTTTGAATATGTTGCTTTTGTTG AAGGGAAAATGCTGCTGATGTGAAAGCAAAATATATAATAGAAGCTGCAAATCATCCCACTGACCCAGACGCAGATGAGGTAAAGTTATCGCATTTATGT TCATTATGAAGTATGTATGATATGATGAACTTATATTATACAGAGGAAGTAATTTGCTACTTACAGATCTTGTCTAAGAAAGGAGTCATTATATTACCTG ACATTTATGCCAATTCTGGTGGAGTGACAGTTAGCTACTTTGAGTGGGTTCAGAATATTCAAGGATTTATGTGGGATGAAGAGAAAGTGAACCATGAGTT GAAGAAGTACATGACCAAAGCTTTCCGCAACATAAAAGCTATGTGTCAAATTCATAACTGTGACTTACGAATGGGAGCCTTCACTCTAGGAGTGAACCGT GTTGCTCGCGCTACACTTTTGAGGGGCTGGGAAGCTTAAGGAAAGACCTGCATTACTGTTTTCTAAACAAATTTGCTAGTTTTGCTTTTTTCTTTGTTCC TCTTTCTACCTACCTGTTGGAATAAACCTTTTATTTATTTTACTTGTTATCTGAGTTTAGTCTCGTATTTGAGTAGAGTTTTTATATAATAATTTATCAT TGTTAACCTGAGAAAGATGTTACAGGTAGATTCTGTTTCAGACTCTCAGCTTGGCATTTTGAAAACCCTTTAAGATCAGTTCAATTAGGTGAGCCTCGGC TCAACGGTAAGATTGTTTGTCTTGTGATCCAGAATTAAAATTCTGGAAATAACATTTTCACTTAGAGAATAAGGCTATGTATATCTAACATCCTCATACC CAACTAAGTGAGAGCTTCATGCGTTGAATCAAAATTATACGAG
• Tissue: pods
• Gene name: LI_gene_178623;
• Additional information: details;

Expression of Ll_transcript_449407

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.2
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_449407

• Blastp: Glutamate dehydrogenase 2 from Arabidopsis with 85.81% of identity
• Blastx: Glutamate dehydrogenase 2 from Arabidopsis with 85.81% of identity
• Eggnog: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor(COG0334)
• Kegg: Link to kegg annotations (AT5G07440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445028.1)
• Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain (PF02812.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;