| Id Trinity | TRINITY_DN50624_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_449071 |
| Sequence | AGACAACGTATGTAGCAAAAATATTTAATATGATAATGTCAGTGTGAAGAACTCACGAGTTACGATCGGATCATTACAAAATCTACTTGCTTCTGTCTCC CTCTCTCTTTAATTTCCTAAGCACAGCATGGTAAAGTAAACATTCACTGATCCACATAGCAACCAAAAACCAAACTCAGGTTACTGTTGTTTCTTCAATT TGTGTGTCCCAACTTTCAAGCTACATAGCTTAACAAAATCTACCACCACATCATATTCAACCTCATTTTATTCTTTGTACTTTTTACTGCTCTTTGCTCC TGCTATTCACCACAACAAGGTACTACTGCTACTCTTTTCCTTATTCTTGTTCTTCTCTCTCTCTCTCGCTTTCTGGTTTGATATGATGTCACAGCAAATC GGTTTTCATTTTCTCTTTCTGGGTTTGCTATTGTGATGCGTAATGAACTTCAGTTTCTTCCTTTTTCACGTAAAGGAATAAGCTTGTTCATTAATTACTA CTTTAGGAGCATTCATAGTTAAGCTTCTTTGTGAGACAATTTTGATTGGTTAGAGAATGTCAAGGCCTCTGCAGAGAGGGGTTACTGGGGTTAGGACTCC AGATTCCAAATCCAAAGATAAATCAGAAATGGAAGATTGGGATAATAAGAGAAGTTCTTCAGATCACAGCCCTTTATCCCCTTTTCGGTTACATTTTGCG GATAATAATTCTCATTCTAAATATGGCATCAATGAAAATGGTTTTACTTCTGATCCCTTCATTGTTGGCTCCCCACGAAGTCGGGTTAAGTTGATGATGC TTTTAATGAAGTTTAGTCTAGCGTTTATAGTTGTTCTTGCTCTCACTGGATCCTTTTGGTGGACGATGTCGATTTCGTCCTCATCAAGAAGTCACATTTA CCATGGTTATAGAAGGCTCCAAGAGAAACTTGTATCAGACCTGATTGATATTAGTGAGTTAAGTAGTGGTCCATCAAAGTTTAAAGAATTGGAATCCTGT TCCGAAGAGCTCGAAAATTTTGTGCCTTGTTTCAATGTTTCTGAGAATCTAGCTCTTGGTAGTACTGATGGAAATGAGTTTGACCGGCAATGCAGTCGTG AGCTCAGGCAATATTGTTTGGTTCTCCCGCCCGTGAATTACAAAATTCCTCTTCATTGGCCTACTGGAAGAGATGTCATCTGGATTGCTAATGTCAAAAT CACTGCAGAGGAGGTTCTTTCTTCTGGAACATTGACCAAGAGGATGATGATGTTGGACGAGGAACAAATTTCATTTCGTTCAGCCTCTCATATGTTTGAT GGCATTGAAGACTACTCACATCAAATTGCAGAAATGATGGGACTTAGAAATGAATCTTACTTCATACAAGCTGGGGTTCGAACGATATTGGATATAGGTT GTGGCTATGGTAGCTTTGGAGCACATCTCTTTCACAGTCAGCTTTTAACTACGTGCATTGCAAACTATGAGCCTTCTGGCAGTCAAGTTCAGCTCACTCT CGAGAGGGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAACAGTTGCCATATCCGTCTCTCTCTTTTGATATGTTACATTGTGCATGGTGTGGCATT GATTGGGACAAGAAAGATGGCACTCTCTTGATTGAAGCTGATAGACTTCTAAAACCGGGTGGGTACTTTGTCTGGACATCACCACTTATAAAATCGCGTA ACAAAGAGGATCAGAAACGGTGGAAGTTGGTACAGGATTTTACAGAAAATCTTTGCTTCGAATTGTTGTCACAGCAAGATGCAACTGTCGTTTGGAAGAA AACTAGTAAAAAGAGTTGCTATAGTTCAAGAAAGTCTAGTTCTGCCCCTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_178641; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_449071
| Blastp | Probable pectin methyltransferase QUA2 from Arabidopsis with 64.14% of identity |
|---|---|
| Blastx | Probable pectin methyltransferase QUA2 from Arabidopsis with 64.51% of identity |
| Eggnog | pectin methyltransferase(ENOG410Y9W6) |
| Kegg | Link to kegg annotations (AT1G78240) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460930.1) |
| Pfam | Putative S-adenosyl-L-methionine-dependent methyltransferase (PF03141.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |